Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1049 ATGCTGTTGTGGCCTCGCACTCCAACCTTTAGGCGGTCTCTACGTTCTCTTTCCAACGCCCATCGGAATCCTCACCATTCATCCTTTTTCCACCTAAACCTTTCTTCTTCAATCCAACCTCAGGTTTCTGGCGTCTTGGACGACGATTGCGAAGGCTTCTTGCCATGGTTAGAGTGGAAAGCTGGCTCTGGGATTTCATCATCGCTTTCAATCGGGAAATCTTCGTATGGCAGGTCTCTGTTTGCCTCTAGGATTATACACCCTGGAGAATGCATTTTACAAGTTCCTTATGCCGTGCAAATAAGTGTGGATAATTTACTCCCAGAAATCAGATCTTTGATCAGCAATGAAGTTGGAAATATTTCAAAACTTGCTGCTGTTATTCTAGTTGAGCAGAAACTGGGTCGGGACTCCGAGTGGGACCCATATATCAGCTGTCTTCCTCAGCAAGGACAGCTGCATAATACAATATTTTGGAGTGAAAGTGAATTGGACATGATTCGGATAAGCTCAGTGTATCAGGAAACTATCAATCAAAAGTCTCAAATTGAGAAGGACTTTTTGGCAATCAGACCAGTTTTCGAAAGCCTCCTTAAAAGTTTTGGAGAATTTACTTTCAGGGATTTCATGCACGCGTGCACGCTTGTTGGTTGTCGGGCATGGGGAAGCATGAAGGGCTTATCTCTGATTCCGTTTGCAGATTTCTTGAATCACGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATACTCAGAAGTTATAGCTGATCGTGGCTATGCTCCTGGTGAACAGGTCCAGATCCAGCTTGAAATACCCAAGCATGATTCCCTGCATGACATGAAAATGGAACTCTTGAGGCGATATTTTGTGCGCTCTCCCAAAGACGTGAAAGGCTTAAGCAACTCTGTGAACTCTTTCATAGTCAAGGAAGTGATACCTACCAGTGCAAAAGGAAAGGGACTTCCACAATCTCTTCGTGCATTTGCTCGCGTCCTTTCTTGCACCTTTCCTCAGGAACTAAATGATTTGGCCATGGAGGCTGCACAAACTGATGGTAGGCTGGCCAGGCGGCCATTGTGCAACATCAACAAAGAGATTGAAGCACACCTGATCTTGTCTTCATTATTCACCAAATTAATTGCAGAGCGCTCTGAAGCTATTATGTCATTGGAATTTTCCAATGCTTCCATTTCTACAAAAGTTGATGTAAGAAGAACAATGGCTCGGGATCTCCTAGTTGGTGAGCTTCGCATCCTCAAATCTGCTTCTGCTTGGCTGGACAATTACTGTTTTTCTTTGTCTGGACAAGCTATTCATTGCTAG 1335 0.439 MLLWPRTPTFRRSLRSLSNAHRNPHHSSFFHLNLSSSIQPQVSGVLDDDCEGFLPWLEWKAGSGISSSLSIGKSSYGRSLFASRIIHPGECILQVPYAVQISVDNLLPEIRSLISNEVGNISKLAAVILVEQKLGRDSEWDPYISCLPQQGQLHNTIFWSESELDMIRISSVYQETINQKSQIEKDFLAIRPVFESLLKSFGEFTFRDFMHACTLVGCRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVIADRGYAPGEQVQIQLEIPKHDSLHDMKMELLRRYFVRSPKDVKGLSNSVNSFIVKEVIPTSAKGKGLPQSLRAFARVLSCTFPQELNDLAMEAAQTDGRLARRPLCNINKEIEAHLILSSLFTKLIAERSEAIMSLEFSNASISTKVDVRRTMARDLLVGELRILKSASAWLDNYCFSLSGQAIHC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1049 444 Pfam Rubisco LSMT substrate-binding 277 423 IPR015353 -
Prci14g1049 444 Gene3D set domain protein methyltransferase, domain 1 14 269 - -
Prci14g1049 444 Pfam SET domain 77 269 IPR001214 GO:0005515
Prci14g1049 444 Gene3D - 270 433 IPR036464 -
Prci14g1049 444 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 46 281 - -
Prci14g1049 444 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 48 366 - -
Prci14g1049 444 SUPERFAMILY SET domain 48 272 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1049 Prci-Chr14 10027525 10051803 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci14g1049 SET 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1049 K19199 - gmx:100818002 538.11