Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1023 ATGTCTTCTCGGATAGTTGCAGATCCGGAGAGCTCGTTTCCGGTGTCGGATACGACATCTTATCTCAGCTCCGTCGAGCTCAGCAGTTCTACAAGTCTTCCGACTGATCATTCCCCCACGCTTGGCCAACTTCTCAAGCATGTCGGAGATGTGCGCAAGGAAACCACCGGAGACGGCGGTGAGACGCCACTGCATCATGCACTTGACCTCGGTGATGGCCATGTCGGACTCGGACCTCGTTCCCTTCCTTTCGTGCTGTCTTTTAGTAATCTCACTTATAGCGTCAAGGTTCGCCGGAAAATGAACTTCTCGGCGTTGTGTTCTCGAGGAAGAAACCGTCTTGGTGCTGCTGCTGTTGATGATACAATGGGTGAAGAGAGCTTCTTCTCGAGCACTAAGACCCTTCTGGATGACATCTCCGGCGAGGCTCGCGACGGCGAGATCATGGCTGTGATGGGCGCTAGTGGTTCCGGCAAGTCTACTCTCATTGACGCCTTGGCCAACCGTATAGCGAAGGGAAGCTTGAAAGGAACAGTGGCTCTGAACGGCGAGGCCATGAACTCGCGGCTTCTAAAGGTGATTTCAGCTTACGTAATGCAAGACGATCTGTTATTTCCAATGCTCACCGTTGAAGAGACTCTCATGTTCGCGGCGGAATTCCGATTGCCTCGAACCCTCTCGAAGTCCAAGAAGAAGATGAGGGTCCAAACTCTGATCGACCAGCTCGGCCTCAGGAACGCTGCAAATACTGTCATCGGAGACGAGGGCCACCGTGGGGTCTCCGGGGGTGAACGCCGGCGCGTGTCCATCGGCATTGACATAATTCACGACCCCATCATCTTGTTCCTGGACGAGCCCACCTCCGGACTGGACTCTACCAGCGCGTACATGGTGGTGAAGGTTCTCCAGAGAATCGCTCAAACGGGAAGCATCGTTATCATGTCCATACATCAGCCCAGTTACAGAATCCTCGGGCTCCTCGATCGTATGATCTTCTTGTCGCGTGGGAAAACAGTCTACAGTGGCTCGCCGATGCAGCTACCGACCTTCTTCTCCGAATTTGGCCACCCCATACCGGAAAACGAGAACCGAACCGAGTTCGCCTTGGATCTGATTCGCGAACTCGAAGGCTCACCAGGTGGTACCAAGAGCTTAGTCGAGTTCAACAAATCATGGCAGAACAAGAAGCATATTGAAAGCAAAAGATCTGATATCAGTCATGGGCAGAGTTTATCTCTGAAAGAAGCAATAAGTGCCGGCATTTCTAAAGGGAAATTAGTTTCAGGCGCGACGAACACTAACACAAGCACAAGTTCGTCATCTTCATGGATGGTTCGAACATATGCGAACCCATTTTGGATCGAACTGGCGACACTGTCAAAACGATCCTTCACCAATTCTCGCCGGATGCCGGAGCTGTTGGCGATGCGACTTGGCACCGTTATGGTCACCGGATTCATCCTCGCCACCGTGTTCTGGCATTTAGATAACTCTCCTAAAGGAGTCCAAGAGAGGCTCGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCCGACGCATTACCGGTTTTCCTTCAAGAGCGACATATCTTCATGAGAGAAACTTCTCATAACGCTTACCGGCGATCGTCGTACCTCATCTCTCACGCTCTCGTTGCCTTCCCGCCATTAATCTTCCTCTCTCTAGCATTCGCCGTCACCACCTTCTGGGCGGTCGGCCTCGACGGAGGATTCTCCGGCTTCGCCTTCTACTTCGCCATCATCCTCGCCTCCTTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCCTGGTCCCTCACGTGATGCTGGGCTACACAATAGTGGTCGCCATCTTAGCCTACTTCTTGCTCTTCAGTGGCTTCTTCATAAACCGAGATCGCATTCCGGCGTACTGGATATGGTTCCACTACATATCTCTGGTGAAGTACCCATACGAAGCTGTTCTTCAGAACGAATTCAGCGACCCATTGAAGTGTTTCGTGAAGGGGGTTCAGATCTTCGATAATACGCCATTAAAGTCGGTGCCGGAGCTTATGAAGATGAAGCTATTGAAGAGCATGAGCGAGACGTTAGGGGTGAACATAACGAGCTCGACATGCTTGACCACTGGTTCAGACATATTGCAACAGAATGGCGTGTTGGATTTGAGCAAGTGGAACTGCTTGTGGATCACTGTGGCTTGGGGTTTCTTCTTTAGGATTTTGTTTTACGTCATGTTGTTGGTGGGAAGCAAGAACAAGAGAAGATGA 2283 0.5173 MSSRIVADPESSFPVSDTTSYLSSVELSSSTSLPTDHSPTLGQLLKHVGDVRKETTGDGGETPLHHALDLGDGHVGLGPRSLPFVLSFSNLTYSVKVRRKMNFSALCSRGRNRLGAAAVDDTMGEESFFSSTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRIAKGSLKGTVALNGEAMNSRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQTLIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSRGKTVYSGSPMQLPTFFSEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQNKKHIESKRSDISHGQSLSLKEAISAGISKGKLVSGATNTNTSTSSSSSWMVRTYANPFWIELATLSKRSFTNSRRMPELLAMRLGTVMVTGFILATVFWHLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAVTTFWAVGLDGGFSGFAFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPAYWIWFHYISLVKYPYEAVLQNEFSDPLKCFVKGVQIFDNTPLKSVPELMKMKLLKSMSETLGVNITSSTCLTTGSDILQQNGVLDLSKWNCLWITVAWGFFFRILFYVMLLVGSKNKRR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1023 760 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Prci14g1023 760 Gene3D - 125 351 IPR027417 -
Prci14g1023 760 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 360 IPR003439 GO:0005524
Prci14g1023 760 Pfam ABC transporter 136 288 IPR003439 GO:0005524
Prci14g1023 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 351 IPR027417 -
Prci14g1023 760 FunFam ABC transporter G family member 6 125 351 - -
Prci14g1023 760 SMART AAA_5 145 337 IPR003593 GO:0016887
Prci14g1023 760 Pfam ABC-2 type transporter 456 664 IPR013525 GO:0016020|GO:0140359
Prci14g1023 760 Pfam ABC-2 type transporter 317 376 IPR043926 GO:0140359
Prci14g1023 760 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1023 Prci-Chr14 9572443 9575239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1023 135 320 Calmodulin-binding Proteins AT2G36910 29.630 1.21e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1023 K05681 - gmx:100803658 1159.05