Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1014 ATGGCGTCACTACTACCATACAGCGATGTTGATTTCAGCTTGAGAGCAATGGCGGGTCGTGCCGAGGGTTTCGGCCGCGACTCCATCGGTGGCCTCCACGGCCCTCTCTATTTTGTTACCACCCTCGCTGATGATGGACCCGGATCCCTTCGAGATGGATGTCGTAGAAAGGAGCCGCTCTGGATTGTTTTTGAAGTTTCGGGTACTATTCATCTATCATCATACCTGAGTGTATCATCTTATAAGACAATAGATGGCCGAGGCCAGAGCATAAAGCTCACAGGAAAGGGCTTGAGGCTGAAAGAATGTGAGCACATAATTGTATGCAACCTTCAGTTTGAAGGTGGCAGGGGTCATGATGTTGATGGCATTCAAATAAAACCAAATTCTAGGCACATATGGATAGATCGCTGCAGTCTTCGTGATTATGATGATGGACTCATAGACATTACAAGACAAAGCACAGATATTACTGTATCTAGATGTTACTTTGCACAGCATGATAAAACCATGCTAATTGGAGCTGACCCATCCCACATCGGCGATAGATGCATCCGTGTGACAATTCATCACTGCTTCTTCGATGGGACACGACAAAGGCAACCTCGTGTTAGATTTGGAAAAGTTCATCTGTACAACAATTACACCAGAAACTGGGGTATATACGCCGTTTGTGCTAGTGTTGAGTCCCAGATATACTCTGAGTGCAACATTTATGAAGCGGGAACTAAGAAAAAGACTTTTGAATTCTATACAGAGAAGGCTGCGGACAAGGAGGAGCAGAAATCTGGCATCATAATATCTGAGGGAGACGTATTTCTGAATGGTGCACAACCATGCTTACAATCACAACACACAGAAGGATGCGTATTCCACCCTTCTGAATATTATCCAGCTTGGACTATGGAGGCACCCTTACATTCTTTCAAAGATGTTCTGCAACTATGTGCAGGTTGGCAATCCATTTCTCGGCCGTTAGACGTCTCGTCTTGTTTGAATTAG 1002 0.4491 MASLLPYSDVDFSLRAMAGRAEGFGRDSIGGLHGPLYFVTTLADDGPGSLRDGCRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQSIKLTGKGLRLKECEHIIVCNLQFEGGRGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSECNIYEAGTKKKTFEFYTEKAADKEEQKSGIIISEGDVFLNGAQPCLQSQHTEGCVFHPSEYYPAWTMEAPLHSFKDVLQLCAGWQSISRPLDVSSCLN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1014 333 SUPERFAMILY Pectin lyase-like 18 327 IPR011050 -
Prci14g1014 333 PRINTS Pollen allergen Amb family signature 20 37 IPR018082 -
Prci14g1014 333 PRINTS Pollen allergen Amb family signature 200 219 IPR018082 -
Prci14g1014 333 PRINTS Pollen allergen Amb family signature 222 241 IPR018082 -
Prci14g1014 333 PANTHER PECTATE LYASE 18-RELATED 15 286 IPR045032 GO:0030570
Prci14g1014 333 SMART amb_all 47 245 IPR002022 -
Prci14g1014 333 Pfam Pectate lyase 76 239 IPR002022 -
Prci14g1014 333 Gene3D - 8 312 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1014 Prci-Chr14 9408842 9412216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1014 42 327 Polysaccharide Lyase AT3G55140 81.469 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1014 K01728 - gmx:100802068 599.356