Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0993 ATGGTGGGTAAGGACGATGCTCGAAAAATGTTCTGGCGGTCGGCTTCTTGGTCGGCGTCTCGTTCTGCCGGACACAATCCGATTGGCGACAACAAGGACTTCGTAGATCCGGATGGGAGTGTTGGTAATATCAACGGGGAAACTCGTAGGTATCCTCCCGCTCCATTAACCCCTCGATCGCAGCAAAATTGCAAAGCTAGGTCGTTTTTGCCTCCGTTACAGCCGCTTTCGATTGCTCGGAGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGATGATATCGGTGAGTGGCCTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGCGAGAGGTTGAAGCTTGATTTATCTTCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAGAGAGATAAGATTGCATACTTTGATAAAGAGTGTTCAAAAGTGGCTGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGAGATAGGGAAATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCTGAGTACTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGACAGTCCAACGGAAGATATTACTAGTATTCTTTATGACGTCTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTGTTTGTGCATTGTTGCCAGGGGGTGTCTCGGTCCACCTCTCTGGTGATTGCATATGTTATGTGGAGGGAAGGACAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCAAATATGGGTTTTGCCTGCCAATTACTACAGTGTCAAAAAAGGGTCCACGCATTCCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATTGCCCCACACTCACCTTATGATCCATTGCATCTTGTCCCCAAAATGTTGACGAATCCTTCTCCATCTGCTCTGGATTCTAGAGGTGCATTTATCATACATATACCTTCTGCAATATATGTTTGGATTGGTAACAATTGTGAGGCCATCATGGAAAGGGATGCTAGAGGGGCTGCTTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCTATTTCGTTAATCAAGGAAGGTGAAGAACCGGATTATTTTTGGGAAGCCTTTTCTAAATTTTTGCCCTTGATGGACAAATCTGATAATAGAGTAGAAAATGGCAAATCATCCTTACATATTTCTCCAGGTGAGAGGAGAGTGGAGTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTCCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCTCTGCAAACATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTTGGATTCAGTGTCAGGCACTCATTCATTGATAAGTTCATCTCCATCACACTCACTGTCATCAAGTACATCTTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTTCGTCTGATTCAAGCAATAGTTCAAAGTGTTCAGAAACATCACTTGATTCTCCTTATGGAGCTTTGACTTCTACGCCAGCATCCTCATCTTTATCTAACTTTTCTAACTTGTCCCTCCTTTCATCTAGTTGTTCTTCTCAACCAGTAACAAAAGGTGCAGTAACTTGTAGTGTCAAGCTGGCATCACAGCCCTGTCATCAGTCAGCCTCTTTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGAAGTCTGTCAAAGTCTTTAAAGTTACCGCTGATGAATGATAAAACACTGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATGGTGCTGTCATGAATGGCAGCGCTAGGCATTTGCATCAATCAGATGGTATAGAAAATTCTTCCGATGTAAACAACCATGTCAAGGGCAGAGGTTTGGATTCAACTCAACAGTCTGAGGTGTTATTATGTTCAGGTGCTGTAGATAGTGTTGACTACAACAAAGCTTCATTTGTTGGAAACTGTAGTTACCCTTGGGTGAGAAGCTCTTCAAGAGAAGACATAAAATCTACTTCTTCAAATGGCATGGATGGAAGTGGTCTACTACAATCTAATAATAAACAAAACTTAGTTTATCAATGGCCCAGCTTAGAGAAGATTGTGACATTCAGTGCAAGTCATTTGGACTCTAAAGCAGCTTTTGTTATTTTTTCTTCAAGTACAAGTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAAGTTCTTTCAGCTGTGCTACATCTCAGGATCGATTAGACAGTAACAGAGAGATAGATTGTCGAGGAGGAGTTGACTGGAATCAAGTTGGTTGTGATATCCTTGCTCATTTTGGTTTGCCAAATGACACTATCATCAAGATTGTTAAAGAGAGCGAAGAACCAGAAGAGTTTCTTGCCTTACTGAGTACCTTGTAG 2517 0.4199 MVGKDDARKMFWRSASWSASRSAGHNPIGDNKDFVDPDGSVGNINGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDREILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYVMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPSALDSRGAFIIHIPSAIYVWIGNNCEAIMERDARGAACQIVRYEKVQGSISLIKEGEEPDYFWEAFSKFLPLMDKSDNRVENGKSSLHISPGERRVESYNVDFEVFQKAIMGGFVPPFASAEDELETHLPARESCWSVLRRKFASANMKEFVSEPKLSYSRVYLDSVSGTHSLISSSPSHSLSSSTSSSSSPYLSPDSISSDSSNSSKCSETSLDSPYGALTSTPASSSLSNFSNLSLLSSSCSSQPVTKGAVTCSVKLASQPCHQSASLLLKKPSTSLAERRGSLSKSLKLPLMNDKTLVMNRSSTFNATREDGAVMNGSARHLHQSDGIENSSDVNNHVKGRGLDSTQQSEVLLCSGAVDSVDYNKASFVGNCSYPWVRSSSREDIKSTSSNGMDGSGLLQSNNKQNLVYQWPSLEKIVTFSASHLDSKAAFVIFSSSTSSGKHARNILYFWLGSSFSCATSQDRLDSNREIDCRGGVDWNQVGCDILAHFGLPNDTIIKIVKESEEPEEFLALLSTL 838
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0993 838 ProSitePatterns Tyrosine specific protein phosphatases active site. 225 235 IPR016130 GO:0016311|GO:0016791
Prci14g0993 838 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 200 261 IPR000387 GO:0016311|GO:0016791
Prci14g0993 838 ProSiteProfiles Dual specificity protein phosphatase domain profile. 141 283 IPR020422 GO:0006470|GO:0008138
Prci14g0993 838 Gene3D Severin 292 388 IPR029006 -
Prci14g0993 838 Gene3D Protein tyrosine phosphatase superfamily 121 283 IPR029021 -
Prci14g0993 838 PANTHER MKPA PROTEIN 7 835 - -
Prci14g0993 838 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 133 282 IPR029021 -
Prci14g0993 838 Pfam Dual specificity phosphatase, catalytic domain 149 279 IPR000340 GO:0008138|GO:0016311
Prci14g0993 838 MobiDBLite consensus disorder prediction 18 70 - -
Prci14g0993 838 SMART dsp_5 141 280 IPR020422 GO:0006470|GO:0008138
Prci14g0993 838 MobiDBLite consensus disorder prediction 493 529 - -
Prci14g0993 838 SUPERFAMILY Actin depolymerizing proteins 735 836 - -
Prci14g0993 838 CDD DSP 142 276 - -
Prci14g0993 838 SUPERFAMILY Actin depolymerizing proteins 288 396 - -
Prci14g0993 838 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci14g0993 Prci-Chr14 9240034 9248585 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0993 1 177 Protein tyrosine phosphatase (PTP) family AT3G55270 65.957 2.28e-72 251
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0993 - - qsa:O6P43_005717 1045.8