Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci14g0993 | ATGGTGGGTAAGGACGATGCTCGAAAAATGTTCTGGCGGTCGGCTTCTTGGTCGGCGTCTCGTTCTGCCGGACACAATCCGATTGGCGACAACAAGGACTTCGTAGATCCGGATGGGAGTGTTGGTAATATCAACGGGGAAACTCGTAGGTATCCTCCCGCTCCATTAACCCCTCGATCGCAGCAAAATTGCAAAGCTAGGTCGTTTTTGCCTCCGTTACAGCCGCTTTCGATTGCTCGGAGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGATGATATCGGTGAGTGGCCTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGCGAGAGGTTGAAGCTTGATTTATCTTCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAGAGAGATAAGATTGCATACTTTGATAAAGAGTGTTCAAAAGTGGCTGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGAGATAGGGAAATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCTGAGTACTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGACAGTCCAACGGAAGATATTACTAGTATTCTTTATGACGTCTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTGTTTGTGCATTGTTGCCAGGGGGTGTCTCGGTCCACCTCTCTGGTGATTGCATATGTTATGTGGAGGGAAGGACAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCAAGAGGTATTGCTGATCCAAATATGGGTTTTGCCTGCCAATTACTACAGTGTCAAAAAAGGGTCCACGCATTCCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATTGCCCCACACTCACCTTATGATCCATTGCATCTTGTCCCCAAAATGTTGACGAATCCTTCTCCATCTGCTCTGGATTCTAGAGGTGCATTTATCATACATATACCTTCTGCAATATATGTTTGGATTGGTAACAATTGTGAGGCCATCATGGAAAGGGATGCTAGAGGGGCTGCTTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCTATTTCGTTAATCAAGGAAGGTGAAGAACCGGATTATTTTTGGGAAGCCTTTTCTAAATTTTTGCCCTTGATGGACAAATCTGATAATAGAGTAGAAAATGGCAAATCATCCTTACATATTTCTCCAGGTGAGAGGAGAGTGGAGTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTCCCTGCTAGGGAGAGCTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCTCTGCAAACATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTTGGATTCAGTGTCAGGCACTCATTCATTGATAAGTTCATCTCCATCACACTCACTGTCATCAAGTACATCTTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTTCGTCTGATTCAAGCAATAGTTCAAAGTGTTCAGAAACATCACTTGATTCTCCTTATGGAGCTTTGACTTCTACGCCAGCATCCTCATCTTTATCTAACTTTTCTAACTTGTCCCTCCTTTCATCTAGTTGTTCTTCTCAACCAGTAACAAAAGGTGCAGTAACTTGTAGTGTCAAGCTGGCATCACAGCCCTGTCATCAGTCAGCCTCTTTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGAAGTCTGTCAAAGTCTTTAAAGTTACCGCTGATGAATGATAAAACACTGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATGGTGCTGTCATGAATGGCAGCGCTAGGCATTTGCATCAATCAGATGGTATAGAAAATTCTTCCGATGTAAACAACCATGTCAAGGGCAGAGGTTTGGATTCAACTCAACAGTCTGAGGTGTTATTATGTTCAGGTGCTGTAGATAGTGTTGACTACAACAAAGCTTCATTTGTTGGAAACTGTAGTTACCCTTGGGTGAGAAGCTCTTCAAGAGAAGACATAAAATCTACTTCTTCAAATGGCATGGATGGAAGTGGTCTACTACAATCTAATAATAAACAAAACTTAGTTTATCAATGGCCCAGCTTAGAGAAGATTGTGACATTCAGTGCAAGTCATTTGGACTCTAAAGCAGCTTTTGTTATTTTTTCTTCAAGTACAAGTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAAGTTCTTTCAGCTGTGCTACATCTCAGGATCGATTAGACAGTAACAGAGAGATAGATTGTCGAGGAGGAGTTGACTGGAATCAAGTTGGTTGTGATATCCTTGCTCATTTTGGTTTGCCAAATGACACTATCATCAAGATTGTTAAAGAGAGCGAAGAACCAGAAGAGTTTCTTGCCTTACTGAGTACCTTGTAG | 2517 | 0.4199 | MVGKDDARKMFWRSASWSASRSAGHNPIGDNKDFVDPDGSVGNINGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDREILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYVMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPSALDSRGAFIIHIPSAIYVWIGNNCEAIMERDARGAACQIVRYEKVQGSISLIKEGEEPDYFWEAFSKFLPLMDKSDNRVENGKSSLHISPGERRVESYNVDFEVFQKAIMGGFVPPFASAEDELETHLPARESCWSVLRRKFASANMKEFVSEPKLSYSRVYLDSVSGTHSLISSSPSHSLSSSTSSSSSPYLSPDSISSDSSNSSKCSETSLDSPYGALTSTPASSSLSNFSNLSLLSSSCSSQPVTKGAVTCSVKLASQPCHQSASLLLKKPSTSLAERRGSLSKSLKLPLMNDKTLVMNRSSTFNATREDGAVMNGSARHLHQSDGIENSSDVNNHVKGRGLDSTQQSEVLLCSGAVDSVDYNKASFVGNCSYPWVRSSSREDIKSTSSNGMDGSGLLQSNNKQNLVYQWPSLEKIVTFSASHLDSKAAFVIFSSSTSSGKHARNILYFWLGSSFSCATSQDRLDSNREIDCRGGVDWNQVGCDILAHFGLPNDTIIKIVKESEEPEEFLALLSTL | 838 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci14g0993 | 838 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 225 | 235 | IPR016130 | GO:0016311|GO:0016791 | |
| Prci14g0993 | 838 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 200 | 261 | IPR000387 | GO:0016311|GO:0016791 | |
| Prci14g0993 | 838 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 141 | 283 | IPR020422 | GO:0006470|GO:0008138 | |
| Prci14g0993 | 838 | Gene3D | Severin | 292 | 388 | IPR029006 | - | |
| Prci14g0993 | 838 | Gene3D | Protein tyrosine phosphatase superfamily | 121 | 283 | IPR029021 | - | |
| Prci14g0993 | 838 | PANTHER | MKPA PROTEIN | 7 | 835 | - | - | |
| Prci14g0993 | 838 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 133 | 282 | IPR029021 | - | |
| Prci14g0993 | 838 | Pfam | Dual specificity phosphatase, catalytic domain | 149 | 279 | IPR000340 | GO:0008138|GO:0016311 | |
| Prci14g0993 | 838 | MobiDBLite | consensus disorder prediction | 18 | 70 | - | - | |
| Prci14g0993 | 838 | SMART | dsp_5 | 141 | 280 | IPR020422 | GO:0006470|GO:0008138 | |
| Prci14g0993 | 838 | MobiDBLite | consensus disorder prediction | 493 | 529 | - | - | |
| Prci14g0993 | 838 | SUPERFAMILY | Actin depolymerizing proteins | 735 | 836 | - | - | |
| Prci14g0993 | 838 | CDD | DSP | 142 | 276 | - | - | |
| Prci14g0993 | 838 | SUPERFAMILY | Actin depolymerizing proteins | 288 | 396 | - | - | |
| Prci14g0993 | 838 | MobiDBLite | consensus disorder prediction | 89 | 111 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci14g0993 | Prci-Chr14 | 9240034 | 9248585 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci14g0993 | 1 | 177 | Protein tyrosine phosphatase (PTP) family | AT3G55270 | 65.957 | 2.28e-72 | 251 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci14g0993 | - | - | qsa:O6P43_005717 | 1045.8 |