Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0956 ATGGGCATCTTGCTGGTCTATGATGTTACTGATGAAGCATCTTTTAATAATGTTAGGAATTGGATTCGCAACATTGAACAACATGCATCTGACAATGTAAACAAGATACTTGTGGGCAACAAGGCTGATATGGATGAAAGTAAAAGGGTTGTGCCTACCTTTAAAGGTCAAGCTCTTGCTGATGAGTATGGTATCAAGTTCTTTGAAACTAGTGCAAAGACAAACATGAACGTGGAAGAGGTTTTCTTTTCAATAGCAAGAGACATCAAGCAAAGGCTTGCTGAAACAGACTCTAGAGCTGAGTCTTTCCAGCATAAAAGCTTTTGGATGCCACGGGACGCAGGATGCTTAGCTGATGACAATATGGGATATGAGAATTCTTCTCGAATTGAACCAAAGCGTGGTCATCAATGGTTTGCAGAAACAGGTGAACCAGAAATTATCAGCAACAATAAGAAGCAAGCTATTGAAGCTGTTGGTGGCAGGCCAATTTCAGGGGTTCCGCATTTGGATGTATCTCCTTGGGACACCAATTCTGGGTTTCACTCAGTTACAGGTCAATATTCTGACCGTATCTTTGGATCTGAGACTTTAAGAACTTTCAATTTGGTTGATAAGAACATGCCATCAATTGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAATTATGGAAATGATCCATCAGTGGGGCTATCAATATCTCATACTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATCAGAATAGTTAAAGTTAATCAAGTTAGAGATACCAACAATTGCATGTCTGCATCTATGGGGCACTCCTATAGTAGGGTGGATAATAGTGCAATTTCGATGGTTGCTGGTTACAGTAAGAATGATGGGAACATATCGTTAGGTCAGGCATACAACAATGTAAATGAGAATATTGTCTCTGCGGGTAGTGCAATAACTAAGGCTCATGATAATCTTGGTTCAATGGGTCACGCATTCAATAAAGGAGATGGAAGTTTTCTGCTGATGGGCCACACTTATGACAAGGGAGATGAAAGCATCTTATCAATGGGTCAGCGATTTGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATGGCAATTTGATATCACTGGGCAACTCATTTAACAAGGGGCATGAAAGCTTTATGTCAATGGGCCCAACCTACGGTAAATCAGGAGAAAATTTCATTTCAATATCTCCTTCCTGTGACAAGGGAACTGGTCATATCATGTCAGTGGGTCCTACATATGACAAGGTGGATTCAAACATGGTATCAACAAACCCTTCATATGATAAAGGAGATTCTAACTCTTTACCAGTGGGTCACAATTACAATAAGAATGATGGCTGTACGATATCTTTTGGAGGCTTTAATGATGACCCAGAGCCAAATCACTCAGGTGGGATTATTAGTGGCTATGATTTGTTGATGAGCAACCAGAACTCAACTCATGGTTTGGATGGCCAGAAGGATCTGGTTGAGTCAAACCTTGAACCAGGTGTAAATAGCAATTCGAAATCTAATTCTAGAAGTGATAATGTCCCTAAGAGTAAGGAACCAAGGACAAGGAAGGTTCCTTCTAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACAGGAATTTTCGATGGTGTTCCTGTAAAGTATGTTTCTTGGTCACGGGAGAAACATCTTAAAGGAGTCATAAAAGGGACTGGGTACTTGTGCTCCTGTAATGAATGCAAGGAGTCCAAGGCTCTTAATGCGTATGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAACACCCGAACAATCACATATACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTTCTCAGGAGATGCTTTTTGATGTAATTCAGACTGTTACTGGATCTACCATCAATCAAAAGAATTTTCGAGCCTGGAAAGCATCGTACCAAGCTGCTACCAGGGAGCTTCAGCGTATATATGGAAAAGATGAAGTAGTCATCCCAGCTTGA 2046 0.4066 MGILLVYDVTDEASFNNVRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTFKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAETDSRAESFQHKSFWMPRDAGCLADDNMGYENSSRIEPKRGHQWFAETGEPEIISNNKKQAIEAVGGRPISGVPHLDVSPWDTNSGFHSVTGQYSDRIFGSETLRTFNLVDKNMPSIGSGNLNMGRKDFENNYGNDPSVGLSISHTIEDPSSCLNFGGIRIVKVNQVRDTNNCMSASMGHSYSRVDNSAISMVAGYSKNDGNISLGQAYNNVNENIVSAGSAITKAHDNLGSMGHAFNKGDGSFLLMGHTYDKGDESILSMGQRFDRGDGNFISIGQSYEKEDGNLISLGNSFNKGHESFMSMGPTYGKSGENFISISPSCDKGTGHIMSVGPTYDKVDSNMVSTNPSYDKGDSNSLPVGHNYNKNDGCTISFGGFNDDPEPNHSGGIISGYDLLMSNQNSTHGLDGQKDLVESNLEPGVNSNSKSNSRSDNVPKSKEPRTRKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKHLKGVIKGTGYLCSCNECKESKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTSQEMLFDVIQTVTGSTINQKNFRAWKASYQAATRELQRIYGKDEVVIPA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0956 681 Pfam Tify domain binding domain 574 628 IPR032308 -
Prci14g0956 681 ProSiteProfiles small GTPase Ras family profile. 1 149 IPR001806 GO:0003924|GO:0005525
Prci14g0956 681 Gene3D - 1 112 IPR027417 -
Prci14g0956 681 PRINTS Transforming protein P21 ras signature 31 44 - -
Prci14g0956 681 PRINTS Transforming protein P21 ras signature 67 89 - -
Prci14g0956 681 SMART rho_sub_3 1 92 IPR001806 GO:0003924|GO:0005525
Prci14g0956 681 PANTHER AUTOIMMUNE REGULATOR 108 633 - -
Prci14g0956 681 MobiDBLite consensus disorder prediction 494 544 - -
Prci14g0956 681 MobiDBLite consensus disorder prediction 509 524 - -
Prci14g0956 681 SMART rab_sub_5 1 92 - -
Prci14g0956 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 94 IPR027417 -
Prci14g0956 681 Pfam Ras family 2 90 IPR001806 GO:0003924|GO:0005525
Prci14g0956 681 ProSiteProfiles small GTPase Rab1 family profile. 1 149 - -
Prci14g0956 681 FunFam Ras-related protein Rab-1B 1 94 - -
Prci14g0956 681 SMART ras_sub_4 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0956 Prci-Chr14 8585349 8594137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0956 536 662 PHD Transcription Factor Family AT3G53680 55.118 9.45e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0956 - - pcin:129292723 1383.62