Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0955 ATGGCAGCGCTACCAGCACGGGCTCGTGCCGATTACGATTACCTCATTAAGCTTCTTCTTGTTGGCGACCGTGGTGTGGGGAAGAGTTGTCTGCTTTTGCGGTTTTCTGATGGTTCCTCCACCACCAGTTTTATCACAACAATTGGGATTGATTTTAAAATAAGAACCATCGAACTTGATGGGAAACGCGTTAAGCTGCAAATCTGGGACACAGCTGGTCAGGAGAGATTTCGAACTATCACCACAGCTTATAACCGTGGAGCCATGGGCATCTTGCTGGTCTATGATGTTACTGATGAAGCATCTTTTAATAATGTTAGGAATTGGATTCGCAACATTGAACAACATGCATCTGACAATGTAAACAAGATACTTGTGGGCAACAAGGCTGATATGGATGAAAGTAAAAGGGTTGTGCCTACCTTTAAAGGTCAAGCTCTTGCTGATGAGTATGGTATCAAGTTCTTTGAAACTAGTGCAAAGACAAACATGAACGTGGAAGAGGTTTTCTTTTCAATAGCAAGAGACATCAAGCAAAGGCTTGCTGAAACAGACTCTAGAGCTGAGTCTTTCCAGCATAAAAGCTTTTGGATGCCACGGGACGCAGGATGCTTAGCTGATGACAATATGGGATATGAGAATTCTTCTCGAATTGAACCAAAGCGTGGTCATCAATGGTTTGCAGAAACAGGTGAACCAGAAATTATCAGCAACAATAAGAAGCAAGCTATTGAAGCTGTTGGTGGCAGGCCAATTTCAGGGGTTCCGCATTTGGATGTATCTCCTTGGGACACCAATTCTGGGTTTCACTCAGTTACAGGTCAATATTCTGACCGTATCTTTGGATCTGAGACTTTAAGAACTTTCAATTTGGTTGATAAGAACATGCCATCAATTGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAATTATGGAAATGATCCATCAGTGGGGCTATCAATATCTCATACTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATCAGAATAGTTAAAGTTAATCAAGTTAGAGATACCAACAATTGCATGTCTGCATCTATGGGGCACTCCTATAGTAGGGTGGATAATAGTGCAATTTCGATGGTTGCTGGTTACAGTAAGAATGATGGGAACATATCGTTAGGTCAGGCATACAACAATGTAAATGAGAATATTGTCTCTGCGGGTAGTGCAATAACTAAGGCTCATGATAATCTTGGTTCAATGGGTCACGCATTCAATAAAGGAGATGGAAGTTTTCTGCTGATGGGCCACACTTATGACAAGGGAGATGAAAGCATCTTATCAATGGGTCAGCGATTTGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATGGCAATTTGATATCACTGGGCAACTCATTTAACAAGGGGCATGAAAGCTTTATGTCAATGGGCCCAACCTACGGTAAATCAGGAGAAAATTTCATTTCAATATCTCCTTCCTGTGACAAGGGAACTGGTCATATCATGTCAGTGGGTCCTACATATGACAAGGTGGATTCAAACATGGTATCAACAAACCCTTCATATGATAAAGGAGATTCTAACTCTTTACCAGTGGGTCACAATTACAATAAGAATGATGGCTGTACGATATCTTTTGGAGGCTTTAATGATGACCCAGAGCCAAATCACTCAGGTGGGATTATTAGTGGCTATGATTTGTTGATGAGCAACCAGAACTCAACTCATGGTTTGGATGGCCAGAAGGATCTGGTTGAGTCAAACCTTGAACCAGGTGTAAATAGCAATTCGAAATCTAATTCTAGAAGTGATAATGTCCCTAAGAGTAAGGAACCAAGGACAAGGAAGGTTCCTTCTAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACAGGAATTTTCGATGGTGTTCCTGTAAAGTATGTTTCTTGGTCACGGGAGAAACATCTTAAAGGAGTCATAAAAGGGACTGGGTACTTGTGCTCCTGTAATGAATGCAAGGAGTCCAAGGCTCTTAATGCGTATGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAACACCCGAACAATCACATATACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTTCTCAGGAGATGCTTTTTGATGTAATTCAGACTGTTACTGGATCTACCATCAATCAAAAGAATTTTCGAGCCTGGAAAGCATCGTACCAAGCTGCTACCAGGGAGCTTCAGCGTATATATGGAAAAGATGAAGTAGTCATCCCAGCTTGA 2310 0.4147 MAALPARARADYDYLIKLLLVGDRGVGKSCLLLRFSDGSSTTSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYNRGAMGILLVYDVTDEASFNNVRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTFKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAETDSRAESFQHKSFWMPRDAGCLADDNMGYENSSRIEPKRGHQWFAETGEPEIISNNKKQAIEAVGGRPISGVPHLDVSPWDTNSGFHSVTGQYSDRIFGSETLRTFNLVDKNMPSIGSGNLNMGRKDFENNYGNDPSVGLSISHTIEDPSSCLNFGGIRIVKVNQVRDTNNCMSASMGHSYSRVDNSAISMVAGYSKNDGNISLGQAYNNVNENIVSAGSAITKAHDNLGSMGHAFNKGDGSFLLMGHTYDKGDESILSMGQRFDRGDGNFISIGQSYEKEDGNLISLGNSFNKGHESFMSMGPTYGKSGENFISISPSCDKGTGHIMSVGPTYDKVDSNMVSTNPSYDKGDSNSLPVGHNYNKNDGCTISFGGFNDDPEPNHSGGIISGYDLLMSNQNSTHGLDGQKDLVESNLEPGVNSNSKSNSRSDNVPKSKEPRTRKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKHLKGVIKGTGYLCSCNECKESKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTSQEMLFDVIQTVTGSTINQKNFRAWKASYQAATRELQRIYGKDEVVIPA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0955 769 SMART ran_sub_2 21 227 - -
Prci14g0955 769 Pfam Ras family 17 178 IPR001806 GO:0003924|GO:0005525
Prci14g0955 769 ProSiteProfiles small GTPase Rab1 family profile. 11 237 - -
Prci14g0955 769 PANTHER LD44762P 11 186 - -
Prci14g0955 769 MobiDBLite consensus disorder prediction 582 632 - -
Prci14g0955 769 MobiDBLite consensus disorder prediction 597 612 - -
Prci14g0955 769 SMART arf_sub_2 1 181 - -
Prci14g0955 769 SMART rab_sub_5 16 180 - -
Prci14g0955 769 Gene3D - 9 197 IPR027417 -
Prci14g0955 769 FunFam ras-related protein RABE1c-like 9 207 - -
Prci14g0955 769 ProSiteProfiles small GTPase Ras family profile. 6 237 IPR001806 GO:0003924|GO:0005525
Prci14g0955 769 CDD Rab8_Rab10_Rab13_like 13 180 - -
Prci14g0955 769 SMART ras_sub_4 17 180 - -
Prci14g0955 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 182 IPR027417 -
Prci14g0955 769 PRINTS Transforming protein P21 ras signature 39 55 - -
Prci14g0955 769 PRINTS Transforming protein P21 ras signature 57 79 - -
Prci14g0955 769 PRINTS Transforming protein P21 ras signature 155 177 - -
Prci14g0955 769 PRINTS Transforming protein P21 ras signature 119 132 - -
Prci14g0955 769 PRINTS Transforming protein P21 ras signature 16 37 - -
Prci14g0955 769 SMART rho_sub_3 18 180 IPR001806 GO:0003924|GO:0005525
Prci14g0955 769 Pfam Tify domain binding domain 662 716 IPR032308 -
Prci14g0955 769 ProSiteProfiles small GTPase Rho family profile. 9 182 - -
Prci14g0955 769 NCBIfam small GTP-binding protein domain 14 170 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0955 Prci-Chr14 8585349 8594162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0955 624 750 PHD Transcription Factor Family AT3G53680 55.118 2.00e-39 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0955 - - pcin:129292723 1544.64