Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0880 ATGTCTTCCTCTCCATCGATGGCTTCCTTCTTCACCCCAACGTTTCTTCTTTCATACATAACACTTTCATTATTGCCCCGTATTTCTTCGTATTCGATCACCAACGATTATCATAAAGCTTGCAGTGCTCGGTACGATTGTGGGAAGATTAGCAACGTTGGGTTTCCTTTCTGGGGACATGGCCGTCCAGAAGGTTGTGGCTACCCTGATTTGTATCTCAATTGTTCTGAAGGTTCGACCTTCATAACAATCCAAAGGGTCAGATACCTGGTTTTGGAAGCCAATCCAGACCAACACATTCTGAGAATTGTTAGATTCGAGGACTACTCGCAAAATCTGTGCCCAAATCAGCTTGTCAGCACAAGCCTTGACCCTCTGGTGTTTGAAAACGTGCCTGAAACAAAATATCTTACCTTTTTATATGGTTGTCCTTTAATCCCATCAATAAGCTATCTACAACTTCCTTGTCGTAAAAATGGGTTTGGTAATCCATTTGGCTATGTAGTGTTGGATCATATACCTGAAATTTTTGCGTCATGTTCTGCAAGCGTGGTTGTTCCAGTTGAAGTTTCTCCGTCAGAAATCGATTCTTTTGCTTCGAGCATAGTGCAAGGCATACTTAACAAAGGGTTTAGAGTAAAATGGATAGCTGGTATTGCTGAGTGTGCAGAGTGTCAGAGAACCGGCGGAGTCTGTGGCTATGATTTGGGTTCAAATCAGCCTACCTGCTACTCCATAAGAGGTGACCCAGCGCCTCAGCCTCAGGAGCCTCCAGAAAAGAAATCCAAATCAAAAGTTACAACAGGCATTATTGCAGCTGCTGCGGCAGGAGCTTTTTTAATTCTTCTTGGATTATGCCTGTTCTTTATGGTGAGACGAAGGAAAAGAATTGCAGAACAGTCACAATCCAAGGACCTCTTCATGGCTCCTTTTAGCAGAGGCGTTGCTACCTCTACAACAAATTCGTCTCAAAGTGTCCCATCTTACATCACCTCAAAGACTGAATCCATGCAGCACAGTTTCTTCTATGGGGTTAAGGTGTTTAGCTATGCTGAACTAGAGGAAGCCACTAAAAATTTTGATCCTTCCATGGAACTTGGTAATGGAGGTTTCGGCACTGTTTATTATGGCACTCTGAAAGATGGACGTACAGTTGCAGTGAAACGGCTTTATGAAAGCAATCTGAAACGTGTTGATCAGTTCAGGAATGAAGTTGAGATTCTAGCTAAATTACACCATAAAAACCTGGTTGAACTTTATGGATGCACCTCTAGACATAGCCGAGAACTTCTCCTTGTCTATGAATACATTCCTAATGGAACAGTGTCAGACCATCTCCAAGGAAATCGATCAAAGTCTTCTTTGCTCCCTTGGCCTACACGATTGAACATCGCCATAGAAACTGCCGACGCCCTGGCCTATCTTCATAGATCAGATATCATACACCGTGATGTCAAAACCAATAACATTCTTCTAGACCATAAGTTTTGCGTTAAGGTTGCTGATTTTGGTCTTTCAAGGTTGTTCCCCAATGATGTTACCCATGTGTCAACTGCTCCACAAGGAACACCTGGATATGTGGACCCTGAGTATTATCAGTGCTACCAACTCACCAATAAAAGTGATGTTTATAGCTTTGGTGTCGTCCTAGTTGAGCTCATATCATCCTTAGAAGCCGTGGACATAACCAGGCACCGCCATGACATAAATTTAGCCAATCTTGCCATCAACAGAATTCAGAATCATCAAGTGCATGAGTTGATTGATCCGCTTCTGGGGTTTGAAAGAGACAATGCTATTAAGCAGATGACGACAGCAGTGGCGGAATTGGCCTTTAGGTGTCTGCAGCAAGACGGTGACATGAGACCTTCCATGGATGAGGTACTGGAAGTCTTGAGAGGAATCCAAAAAGAGGGGTATGGTAGACAGGACGATGCGCAGAATCATAAGAGAGTTGATGAAATCATGCTTTTGAAAGATGCTCCTCCTCCATTTTCACCAGACTCGGTTGCTGATAAATGGGTTAGCTCCTCTACTGCTTCTAGTTCCTTGTAA 2055 0.4326 MSSSPSMASFFTPTFLLSYITLSLLPRISSYSITNDYHKACSARYDCGKISNVGFPFWGHGRPEGCGYPDLYLNCSEGSTFITIQRVRYLVLEANPDQHILRIVRFEDYSQNLCPNQLVSTSLDPLVFENVPETKYLTFLYGCPLIPSISYLQLPCRKNGFGNPFGYVVLDHIPEIFASCSASVVVPVEVSPSEIDSFASSIVQGILNKGFRVKWIAGIAECAECQRTGGVCGYDLGSNQPTCYSIRGDPAPQPQEPPEKKSKSKVTTGIIAAAAAGAFLILLGLCLFFMVRRRKRIAEQSQSKDLFMAPFSRGVATSTTNSSQSVPSYITSKTESMQHSFFYGVKVFSYAELEEATKNFDPSMELGNGGFGTVYYGTLKDGRTVAVKRLYESNLKRVDQFRNEVEILAKLHHKNLVELYGCTSRHSRELLLVYEYIPNGTVSDHLQGNRSKSSLLPWPTRLNIAIETADALAYLHRSDIIHRDVKTNNILLDHKFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTNKSDVYSFGVVLVELISSLEAVDITRHRHDINLANLAINRIQNHQVHELIDPLLGFERDNAIKQMTTAVAELAFRCLQQDGDMRPSMDEVLEVLRGIQKEGYGRQDDAQNHKRVDEIMLLKDAPPPFSPDSVADKWVSSSTASSSL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0880 684 CDD STKc_IRAK 366 635 - -
Prci14g0880 684 SUPERFAMILY Protein kinase-like (PK-like) 335 635 IPR011009 -
Prci14g0880 684 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 332 436 - -
Prci14g0880 684 MobiDBLite consensus disorder prediction 659 684 - -
Prci14g0880 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Prci14g0880 684 FunFam Wall-associated receptor kinase-like 20 437 645 - -
Prci14g0880 684 MobiDBLite consensus disorder prediction 245 264 - -
Prci14g0880 684 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Prci14g0880 684 Pfam Protein tyrosine and serine/threonine kinase 365 632 IPR001245 GO:0004672|GO:0006468
Prci14g0880 684 Gene3D Phosphorylase Kinase; domain 1 330 436 - -
Prci14g0880 684 SMART serkin_6 360 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0880 684 Pfam Wall-associated receptor kinase C-terminal 176 245 IPR032872 -
Prci14g0880 684 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Prci14g0880 684 ProSiteProfiles Protein kinase domain profile. 360 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0880 684 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Prci14g0880 684 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 678 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0880 Prci-Chr14 7727099 7743619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0880 45 680 Receptor kinase-like Gene Family AT1G25390 43.227 4.25e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci14g0880 PK_Tyr_Ser-Thr 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0880 - - aprc:113867558 687.567