Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0830 ATGTACACTTCAAGAAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAATTTGAGGAGACAGTTGCACAGTACCTATTTGATTTGGAGAACACTAATCAGGAGCTGAAAAGTGACCTGAAGGATCTCTACATTAATCAAGCAGTTCAAATGGATGTTGCTGGGAATCGCAAAGCTGTTGTTATCTATGTCCCTTACAGATTGAGGAAGGCATTCCGCAAGATTCATCTCAGACTTGTTAGAGAATTGGAAAAGAAATTCAGTGGAAAGGATGTTGTTGTGATTGCTACAAGAAGGATTTTGCGGCCACCAAAGAAGGGTTCTGCTGTTCAACGACCTCGCACCCGCACCCTAACAGCTGTCCATGATGCCATGCTGGAGGATGTTGTGCATCCTGCTGAGATTGTTGGCAAGCGAGTCAGATATAGGGTTGATGGATCAAAAATAATGAAGGTATTCTTGGACCCTAAAGAGCGCAATAACACTGAATACAAGCTAGAAACTTTTTCTGGAGTTTACAGGAAGCTTACTGGGAAAGATGTCGTATTTGAGTATCCAATCACTGAAGCCTGA 576 0.4236 MYTSRKKIHKDNDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAVQMDVAGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVVIATRRILRPPKKGSAVQRPRTRTLTAVHDAMLEDVVHPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0830 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Prci14g0830 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Prci14g0830 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Prci14g0830 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0830 Prci-Chr14 7262999 7265115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0830 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.675 4.16e-117 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0830 K02993 - gmx:100500684 365.925