Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0804 ATGGTTGCCGCCAAGAAAACTAAGAAGACCCATGAGAGTATCAATAACAGGCTCGCTCTTGTGATGAAGAGCGGAAAATATACCCTGGGTTATAAAACGGTTCTGAAGTCCCTTAGGAACTCTAAAGGGAAACTGATTATTATTGCCAACAACTGCCCGCCTTTGAGGAAATCAGAAATAGAATACTATGCTATGTTGGCGAAGGTTGGAGTTCATCATTACAATGGGAGGGTTCTTGATGCAGACAATGTTGATTTGGGCACTGCTTGCGGCAAATATTTCAGAGTGTGCTGTCTCAGCATCATTGATCCCGGCGATTCTGACATTATTAAGACAATGCCTGGCGATCAGTAG 354 0.435 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGRVLDADNVDLGTACGKYFRVCCLSIIDPGDSDIIKTMPGDQ 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0804 117 FunFam 60S ribosomal protein L30 2 113 - -
Prci14g0804 117 SUPERFAMILY L30e-like 13 112 IPR029064 -
Prci14g0804 117 ProSitePatterns Ribosomal protein L30e signature 2. 85 105 IPR022991 -
Prci14g0804 117 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
Prci14g0804 117 Gene3D - 2 113 IPR029064 -
Prci14g0804 117 PANTHER RIBOSOMAL PROTEIN L30 1 115 IPR039109 GO:0003723
Prci14g0804 117 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 110 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0804 Prci-Chr14 7097916 7100328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0804 1 117 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 82.906 1.61e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0804 K02908 - sly:101254162 219.164