Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0780 ATGGCAAGGGTAAGAGATAGAACGGAGGATTTTAAAGATGCTGTGCGAAAGAGTGCTCGCTCTTTGGGGTATGATGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATCATTCACAAACCTCGGCAAAGGTCACCATTTACTAAAGCTGCATTGAAGACGCTTGAGAGTATTGGAGAATTGGACCAGTTCTTGTTGAAGCACAGAAAGGATTATACAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATAGAACATGAAGTTAGTGCTTTTATTAAAACTTGTCAAGAGCAAATTGATGTTCTCAAAAACAGTATTAATGATGAAGAGGTGAACTCAAAAGGCTGGCTTGGCATTGCAGCTGCAAAGTCTAATACTGACATTATTGCCCACAAACATGGGGTGGTTCTAATTCTGAGCGAGAGACTTCATTCAGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCCATTAATAGAGCTACACCGCGAAGAAAACTTAACCATATGACCAAAAAGGATTCTGCCGAAGGCCCAAACATGGGCAATATGGAGCTTAGAGAACCTGATGAATTACAGAGTGAGCCTCTTAGAGTCCAACGGCAACTTTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTGGTCTCCTAGATGCAGTTCAAGAGACTGAAACAAAAATGGTGGAAATGTCTGCACTGAATCACCTATTATCGACCCATGTTTTGCAACAAGCTCAGCAAATTGAGCTCCTTTATGAGCAGGCTGTTGAAGCTACCAAGAATGTGGATCTTGGTAACAAGGAACTATCCCAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTGTTGTTTCTTTTTGTACTTACATTTTCTGTGCTCTTTCTTGATTGGTACAGCTGA 930 0.4258 MARVRDRTEDFKDAVRKSARSLGYDEAKLASVMASFIIHKPRQRSPFTKAALKTLESIGELDQFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNSINDEEVNSKGWLGIAAAKSNTDIIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRATPRRKLNHMTKKDSAEGPNMGNMELREPDELQSEPLRVQRQLLDDETRALQVELTGLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIELLYEQAVEATKNVDLGNKELSQAIQRNSSSRTFLLLFLFVLTFSVLFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0780 309 PANTHER SYNTAXIN-18 1 309 - -
Prci14g0780 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Prci14g0780 309 Coils Coil 94 114 - -
Prci14g0780 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Prci14g0780 309 Gene3D - 216 306 - -
Prci14g0780 309 FunFam Syntaxin-81 like 212 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0780 Prci-Chr14 6463655 6469177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0780 65 309 SNARE and Associated Proteins AT1G51740 74.390 4.65e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0780 K08492 - qsa:O6P43_016722 516.153