Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0680 ATGCTTCCTGGTTTGGGATTTCCGATGAATCTTGGCCGCGTAATGGAATCCTCTGATAGTAATCGGAAGGTCCTCAGTGAAGTGGACTTTTTCTCTAACCCAAGCAAGTCGTCGTCTTCTTCAGCACCACCAGCTCATGAAATTCATCATCATCACCAACATCAAGACGTTCAAACCCTTACCAATATCTCTGTCAAGAAGGAGATTTCTCAGACTCAACCAGTTTCTAGGTCTAATTTGGATATGAATATTGGTTTGCAACTGCATACTGGTAATACCAGGAGTGATCAGTCTACAGTGGATGATCATGCCGTCTCGTCAGAAGCAGATGATAAGCGAGGCAAGAGCAACGAGTTGAAACAACTGCGAGAAGAGCTTCAGCGAATGGATAAAGAAAACCAGAATCTGAAAGAGACGCTGAGCCACATGAGCAGTAACTACACGGCCCTACAAATGCATCTCGCCGCATTAATCCAACAGAGACAACACAACCAACAAGCCCAGACCACACGACACGATCATCAGGTTGTTGGAAAAGGTGAGGAGATCAAAAAACAGGTTGCGAGGCAGTTTCTTGAGCTTGGAGGAGCTAGTGGTGGCGAAGCAGAAGCTGAGGTTGATGATGAAGTATCCAATTCTTGTTCAGATGAAAGAACTCAATCTGCTTCACCTCATCAGAACAACAATAGCGGTAAAAGTCATGAGAGGGGCAGGGAAGAGAGTCCAGATTCAGAATTACAAAAAGCTTATAAGCTTCAGAAACTGAACAATAATCACCTTTCTTCAAACCCCATGGATCAATCCACTGCTACTACAACAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGCGCCAGATCAGAAGCTCCCATGATCAGTGATGGTTGTCAATGGCGAAAATATGGACAAAAAATGGCCAAAGGAAACCCATGTCCTCGTGCTTATTACAGATGCACCATGGCCGTTGGTTGTCCTGTTCGTAAACAAGTTCAGCGTTGCGCAGAAGACAGAAGCATATTGGTAACAACGTATGAAGGGAATCATAACCATCCATTGCCTCCGGCAGCCATGGCGATGGCTTCGACGACGAGTGCAGCTGCAGGCATGTTGCTGTCCGGTTCAATGTCGAGTCCAGAAGGGATGATGAAGATGAACCCTATGTTAGCGAGAGCCATTCTTAACCCCTCTTGCTTTCCAACCATGGCTACTCTTTCTGCTTCGGCACCTTTCCCTACTGTAACATTGGACCTCACTCACAACAACAACAACAACAACGTCGCGATGCAGTTTCAACGTTCTTCTACGACGCCGCTTCAGATGATTCCATCACTGTATAACCATTCCAAGTTTTCTGGCCTTCAGTTGTCACAGGATAGGCCAGTTCAGCAGTCCGACGCCGTCGGAAACGCAGCCTCGGCGATCACTGCTGACCCGAACTTCACGGCGGCTCTTGCGGCTGCTATCTCTTCCATCATCCGTGGTAATGATCACCAGAACAATAGTGGAGGCACTAGCAGCAATCCTCATATCCTAAATAGTACTTCAATCAGCAGCTTTTCTGGGAATTAA 1572 0.4676 MLPGLGFPMNLGRVMESSDSNRKVLSEVDFFSNPSKSSSSSAPPAHEIHHHHQHQDVQTLTNISVKKEISQTQPVSRSNLDMNIGLQLHTGNTRSDQSTVDDHAVSSEADDKRGKSNELKQLREELQRMDKENQNLKETLSHMSSNYTALQMHLAALIQQRQHNQQAQTTRHDHQVVGKGEEIKKQVARQFLELGGASGGEAEAEVDDEVSNSCSDERTQSASPHQNNNSGKSHERGREESPDSELQKAYKLQKLNNNHLSSNPMDQSTATTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGMMKMNPMLARAILNPSCFPTMATLSASAPFPTVTLDLTHNNNNNNVAMQFQRSSTTPLQMIPSLYNHSKFSGLQLSQDRPVQQSDAVGNAASAITADPNFTAALAAAISSIIRGNDHQNNSGGTSSNPHILNSTSISSFSGN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0680 523 MobiDBLite consensus disorder prediction 101 117 - -
Prci14g0680 523 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci14g0680 523 SUPERFAMILY WRKY DNA-binding domain 286 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci14g0680 523 MobiDBLite consensus disorder prediction 215 230 - -
Prci14g0680 523 FunFam probable WRKY transcription factor 31 278 355 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 250 277 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 89 117 - -
Prci14g0680 523 Pfam WRKY DNA -binding domain 295 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci14g0680 523 Gene3D WRKY domain 277 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci14g0680 523 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 81 503 IPR044810 GO:0003700
Prci14g0680 523 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci14g0680 523 Coils Coil 105 146 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 499 523 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 196 277 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 32 58 - -
Prci14g0680 523 MobiDBLite consensus disorder prediction 231 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0680 Prci-Chr14 5837885 5840673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0680 7 503 WRKY Transcription Factor Family AT1G62300 49.538 3.30e-140 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci14g0680 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0680 - - gmx:100802124 478.018