Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0657 ATGAGTTCAGCATTCATCATAGTTATATGTTTACTATGGCTTGCATCGACATTGACACTCACACATGGAGCATCAAGGGAAGTAGTAAATATTGGAGCTATTTTCACATTTAAAACTATAAATGGACGAGTTTCTAAAATTGCCATCAAAGCTGCAGAAAAAGATGTGAATTCTGATCCACGCATCCTTGGTGGACGCAAATTGTCCATAACCCTGCACGATTCGAACTTCAGTGGTTTTCTTGGCTTCATTGGAGCGCTCAAGTTCTTGGAGAGGGACTCGGTTGCTATTATTGGTCCACAGAGTTCAGTAATGGCCCCTGTGCTCTCACATTTGGCAAATGAACTCCATGTTCCTCTTCTGTCATTTACAGCTCTGGATCCTACTCTGTCACCGCTGCAGTACCCTTATTTTTTGCAAACAGCACCCAATGATCAATTCCAGATGACTGCAGTGGCAGACATGATTAGCTATTTTGGTTGGAAAGAGATTATTTCTATTTATAGTGATGATGATCAAAGTCGAAATGGTGTCACTGTATTGGGAGATAAACTTGCTGAAAGGCGCTGTAAGATATCCTATAAAGCAACACTGCCCCCTGATCCAACTGCTCGTCGAAATGATATCACTATTCTGTTGACCAGGGTTCAAAGTATGGAGTCCAGAGTGATTGTTCTTCACACCTTCTCCCAGACAGGTCTCCTGGTTTTTGATGTGGCTCAGGAATTAGGAATGATGACTGAAGGTTATGTCTGGATAGCCTCTTCTTGGTTATCAACTGTTTTAGACTCGACTTCACCACTTCCTTTGAATACTTCTTACTCAATCCAAGGAGTTCTTACGCTTCGCCCTCACACCCCACAATCTAAAAGAAAACAGGTCTTTATGTCCAGGTGGAACCAGATGAGTAATGGTTCAATTAGGTTGAATCCGTATGGACTCTATGCTTATGATTCTGTTTGGATCATTGCCCTTGCATTGAAATCATTTTTTGATCAGAATGGCAATCTTTCATTCTCTAATAATACAAATTTAAACCATATGAGAGGGGAGGCTCTGGATCTTGGTTTTTTGAGCGTTTTCAATGGAGGGAAACAATTGCTTGATAACATACTGCGCATTAATATGACTGGATTGACAGGACCTATTCAATTTCGTTCAGATAGATCCCCCTTAAATCCATCATATGACATCCTTAATGTAATCAATAGTAGTTATAGGCGAATTGGGTACTGGTCCAATTATTCGGGGCTATCTGTTATTCCTCCTGAGAAGCTTCACACTAAGCAAGCCAACCGATCAATTTTAAACCAGCACCTCTCCAGTATAAGTTGGCCTGGTGGTACAACAGAAAAGCCTCGGGGGTGGGTTTTTCCAAATAATGGAAGACAGCTAAGAATTGGTGTCCCTAATCGAGTTAGTTATCAGAACATGGTCTCACAAATAAATGGTACCAATGAAGTTCAAGGATACTGCATAGATGTATTCCTCGCTGCCATAAAATTACTACCATATGCAGTTCCATACAAGTTTGTTCTGTTTGGAGATGGACATAAGAACCCCAACTTTGACCTTGTGAATATGATTAATTCTGATGTGTTTGATGGTGCTGTAGGTGATATTGCCATTGTCACTGACCGAACAAAGATTGTGGATTTTACCCAACCATATGTAGAGTCAGGACTTGTGGTGGTTACAAAAGTAAAACAATTGAAGTCAAGTGCCTGGGCTTTCTTGCGACCTTTTACTCCATTAATGTGGGGTGTTACTGCTGTTTTCTTCCTCATTGTTGGAGCAGTTGTGTGGATTCTTGAACATAGGACAAATGATGAGTTCCGGGGGCCTCCTAAGAAACAAATTGTCACAATTCTCTGGTTTAGCCTCTCCACCATGTTCTTTGCACACAGAGAGAATACAGTTAGTGCACTCGGTCGTATTATATTAATCATCTGGCTTTTTGTGGTTTTGGTAATCAATTCAAGCTATACTGCAAGCCTAACATCAATTCTCACTGTGCGACAACTTTCCTCACCAATAACTGGGATCGATACCTTGATAACCAGTAATGAACGTATAGGATTTCAAGTAGGATCATTTGCTGAAAACTATCTAACTCAGGAACTCAACGTCCCAAAACATCGACTTATTCCTCTTGGTTCACCAGAAGAATATGCTATCGCTCTCGAGAGGGGAACCGTTGCAGCTGTTGTTGATGAACGACCATATGTAGAACTCTTCATGTCAAATCACTGCAAATTCTCCATTAGAGGCCAGGAGTTCACCAAAAGTGGATGGGGATTTGCCTTCTCAAAGGACTCTCCTTTATCCATTGATATGTCAACTGCCATTCTGACTCTGTCTGAAAATGGCGAACTCCAGAAGATTCATGAGAAGTGGCTCTCAACAAAGGCTTGTGCGTTCAAGATTACAGAGGAGGGATCCGAGCAACTTCAGCTAGAAAGCTTTTGGGGCCTGTTTTTGTTATGTGGGATAGTAAGTTTCCTGGCGCTTCTTGTCTATTTGGTCTTGATGATTCTCCAGTTCTGCCGTGACTTCCCCCAAAATGGTGGTCCTTCTAATGGTGGCGGCTCGCGCTCTGCACGCATCCAGACATTTCTAAGTTTTGCTGATGAAAAAAAAGACATGTCACTGTCACAAAGAAAGCTTAAAAGAAAACGCAAGGATTTTTCATAG 2694 0.415 MSSAFIIVICLLWLASTLTLTHGASREVVNIGAIFTFKTINGRVSKIAIKAAEKDVNSDPRILGGRKLSITLHDSNFSGFLGFIGALKFLERDSVAIIGPQSSVMAPVLSHLANELHVPLLSFTALDPTLSPLQYPYFLQTAPNDQFQMTAVADMISYFGWKEIISIYSDDDQSRNGVTVLGDKLAERRCKISYKATLPPDPTARRNDITILLTRVQSMESRVIVLHTFSQTGLLVFDVAQELGMMTEGYVWIASSWLSTVLDSTSPLPLNTSYSIQGVLTLRPHTPQSKRKQVFMSRWNQMSNGSIRLNPYGLYAYDSVWIIALALKSFFDQNGNLSFSNNTNLNHMRGEALDLGFLSVFNGGKQLLDNILRINMTGLTGPIQFRSDRSPLNPSYDILNVINSSYRRIGYWSNYSGLSVIPPEKLHTKQANRSILNQHLSSISWPGGTTEKPRGWVFPNNGRQLRIGVPNRVSYQNMVSQINGTNEVQGYCIDVFLAAIKLLPYAVPYKFVLFGDGHKNPNYXDLVNMINSDVFDGAVGDIAIVTDRTKIVDFTQPYVESGLVVVTKVKQLKSSAWAFLRPFTPLMWGVTAVFFLIVGAVVWILEHRTNDEFRGPPKKQIVTILWFSLSTMFFAHRENTVSALGRIILIIWLFVVLVINSSYTASLTSILTVRQLSSPITGIDTLITSNERIGFQVGSFAENYLTQELNVPKHRLIPLGSPEEYAIALERGTVAAVVDERPYVELFMSNHCKFSIRGQEFTKSGWGFAFSKDSPLSIDMSTAILTLSENGELQKIHEKWLSTKACAFKITEEGSEQLQLESFWGLFLLCGIVSFLALLVYLVLMILQFCRDFPQNGGPSNGGGSRSARIQTFLSFADEKKDMSLSQRKLKRKRKDFS 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0657 898 Gene3D - 460 575 - -
Prci14g0657 898 SUPERFAMILY Periplasmic binding protein-like II 441 802 - -
Prci14g0657 898 SUPERFAMILY Periplasmic binding protein-like I 24 457 IPR028082 -
Prci14g0657 898 SMART GluR_14 466 803 IPR001320 GO:0015276|GO:0016020
Prci14g0657 898 Pfam Receptor family ligand binding region 47 402 IPR001828 -
Prci14g0657 898 Gene3D - 728 808 - -
Prci14g0657 898 FunFam Glutamate receptor 460 576 - -
Prci14g0657 898 Gene3D - 144 418 - -
Prci14g0657 898 Gene3D - 576 710 - -
Prci14g0657 898 Pfam Ligand-gated ion channel 803 832 IPR001320 GO:0015276|GO:0016020
Prci14g0657 898 CDD PBP1_GABAb_receptor_plant 30 422 IPR044440 -
Prci14g0657 898 SMART AABind_6 464 804 IPR001638 -
Prci14g0657 898 FunFam Glutamate receptor 702 805 - -
Prci14g0657 898 Pfam Bacterial extracellular solute-binding proteins, family 3 483 802 IPR001638 -
Prci14g0657 898 CDD GluR_Plant 463 801 - -
Prci14g0657 898 Gene3D - 47 393 - -
Prci14g0657 898 FunFam Glutamate receptor 144 303 - -
Prci14g0657 898 PIRSF IGluLR_plant 1 896 IPR017103 -
Prci14g0657 898 FunFam Glutamate receptor 576 706 - -
Prci14g0657 898 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 866 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0657 Prci-Chr14 5654263 5660207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0657 21 896 Ion Channels AT2G17260 61.124 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0657 K05387 - qsu:112010597 1329.69