Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0649 ATGTCTTGCTCCAATCTGACAATGTGGGTTTCTTCGAAACCTTCTTTATCCGATGCTTCTTCCCTCTCCTTCCGTGCATCTCTTAGCCCCCTTTTCCACCTTCCTTCTCAGAACCCATCTCCTTCGCGATCCTCTGTGACCCAAATCCAGTGTGGTCTTCGTGAGCTCAGGGACCGAATTGATTCTGTGAAGAACACCCAGAAAATCACGGAGGCCATGAAGCTCGTCGCCGCCGCAAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGCAGGCCTTTCTCCGAGACCCTTGTCGAAGTCCTTTACAACATCAATGAGCAACTCCAAATCGAAGACGTCGACGTTCCTCTCACAAAAGTTCGACCCGTTAAGAAGGTCGCTTTGGTTGTTTGTACTGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCATTAAAAAAGCAGAAGCCAGAATTGCAGAATTGAAGGAACTGGGTCTTGATTATACCATCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCCTTCGTAGGCCTTATATCCCAGTCGATAGATTTCTCGAACAAGGAACTCTTCCAACTGCAAAAGAAGCTCAGGCCATTGCAGATGATGTTTTCTCGTTATTTGTAAGTGAAGAGGTTGATAAAGTTGAGTTATTATACACAAAGTTTGTGTCTTTAGTGAAATCTGATCCTGTGATTCATACTCTACTGCCTTTGTCACCAAAAGGAGAGATTTGTGATTTGAATGGTAACTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACTACAAGGGAAGGGAAGTTGACTGTTGAGAGAGATGTTTTGAGGACTAAAACAGACGATTTCTCCCCTATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCCTTATTGCCTCTGTACTTGAATTCTCAGATTCTTAGAGCACTGCAGGAATCACTAGCCAGTGAGCTAGCTGCTAGAATGAGTGCTATGAGTAATGCCACTGATAACGCTGTGGAATTGAAGAGGAACTTGTCAAGGGTATACAACAGGGAACGTCAAGCCAAGATCACAGGTGAAATTCTGGAAATTGTTGCTGGTGCCAATGCCCTAACATAG 1122 0.443 MSCSNLTMWVSSKPSLSDASSLSFRASLSPLFHLPSQNPSPSRSSVTQIQCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQIEDVDVPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKAEARIAELKELGLDYTIISVGKKGNSYFLRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDLNGNCVDAAEDEFFRLTTREGKLTVERDVLRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKRNLSRVYNRERQAKITGEILEIVAGANALT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0649 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 271 372 - -
Prci14g0649 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 119 - -
Prci14g0649 373 FunFam ATP synthase gamma chain, chloroplastic 51 118 - -
Prci14g0649 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 FunFam ATP synthase gamma chain, chloroplastic 120 243 - -
Prci14g0649 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 Coils Coil 332 352 - -
Prci14g0649 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 FunFam ATP synthase gamma chain, chloroplastic 269 372 - -
Prci14g0649 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Prci14g0649 373 Gene3D - 120 243 - -
Prci14g0649 373 NCBIfam ATP synthase F1 subunit gamma 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 PANTHER ATP SYNTHASE GAMMA CHAIN 5 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Prci14g0649 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0649 Prci-Chr14 5564566 5566265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0649 24 372 Primary Pumps ATPases AT1G15700 70.225 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0649 K02115 - gmx:100037480 622.468