Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0625 ATGGGCTCTCAAAGGTTGTTACTTTCCCGTGAAAACCCTAGGCCCCTGGGTTTCCCTCCTGGGCGAGTGCTCCCTTCTGCCGCTGCAAAATCCATACCCAATGAGATGGCTCCGAAGCCACTTGCTTCTTCGATATTGGAACGGTTCAAGGCTCTGCTCAAGCAGCGAGACGATGAACAGAGGGCTTTGTCCGACGACGATGTGCTTCCGCCGTCCACCGATGAGATTGTTCAACTTTACGAGATAGTCTTATCCGAGCTTACTTTAAATTCGAAGCCCATCATCACCGAACTTACCATCATTGCGGGAGACCAGAAGGAGCATGGCAGGGGAATAGCTGATGCAATTTGCGATCGAATTATTGAGGTGCCTTCGGAGCACAAGCTTCCTTCACTGTATCTTTTAGACAGTATTGTGAAGAATATTGGTGGGGAGTATGTTGGATACTTCTCCTCACGTCTTCCTGAAGTCTTCTGTGTAGCATATCGGCAAGTCCAGCCTAATTTGCATCATGCAATGCGTCATCTCTTTGGTACCTGGTCAGCTGTCTTTCCACCTTCTGTCCTTCGCAAGATTGAAGTGCAGCTGCGTTTTTCTCAAGCAGTTAATAATCAGAATGTATCATCTAGCATTAATCCCCCTAGGGTGTCTGAAGCTACACAGCGAACTCATGGCATTCATGTTAATCCAAAATACCTGCGGCAGTTGGAAAACTCAACCATGGACACTGATGGGGGTGAAATGTTGGATTCAACAGGAAGCATGGAACATACAAATTTTGGTGTTGGAGCTAATAAGATGCATCAAGCTTCAATAAGCAGGCATGGGAAACAGTATTCTGGTGATGGTCTGAGTCAATTTCAATTTTCCACAAATGGACATCAACGCCAAAATCCAAGAGCTCTCATTGATGCTTATGGCAGTGACAAAAGGACTGAAATTTCAAGCAATAAGCCGCTGGTTGAACCACTTGACATAAATGGTATAGACAACAAGGTGGTGTCAACATCATGGCAGAATACTGAAGAAGAGGAGTTTAATTGGGAAGATATGAGTCCAACATTAGTAGAGCATAAGAGAAGTAATGGGGTCTTACCATCATCAATTATTTTGTCTAGGGAAAGATCTAGTGGTATTGTTGCAGCTAATACTGCTGCTTTGGGTCAAGATACCAGAAGCGGTTGGAATGGTGGCGGATCATTAGGTCAGATAACTGGATTGCATAATCACTTAAATCATGGTCTGGGCTCCCATCCTCCTCATGATGCCTTGAAGATTTCACATCATTTGCCTAACTCTTCACATCACCTTGTTAATATTAGAGGTCGAGCAAGGAATGCTCATTTGTCTCATATTGATAGCATCCCGATTACTAAAGTAAGCTCATATGGGCTTGAGATTCGTCCACCAACTTTACCTGCATCTTTTCGAGCCAGGCCCCCTGTAAATGTGCATGCTACTCGTCCACCCTCCTTAAATCCTATTTTTTCATTGCAGAAACATGTTAGGAGTCAGTTTGAAGCAATAAATAGTAGTAACACCATTTTAGATCAAGGTCCTACTAAATCTTCATTCATGCCTGAACAGCTGTTGGATAGTGATGAGAACAGTAATATTAGTAAATTAACATTTCGGCAGATTCCTAATCAGCTATCAGGGCTAATTTCATCAAACCCGCAAAACCGTGGGCAAGCACTTCAACCTCAAACTTTTCCATCTCAGGATGTGCGAGAAAGTTATTCTGAATTGCAAGCTCCAGCAGCTTCTCAATTTAGTCATGGGGGTTCTTTGCAAAGACATGGTGCTGCTATCAGTGCAACTGTGTCCATGTCGTTACCTATTGGACAGTTTCCTTTACCAGTCCAAAACATCAGAAAAAATGTTTTTCCTATGCAGCAGGGAGCCTTGCCTCCTTCATTTTCAGGTCCTTGCCCTCCATCACAAGTGATGCCTCATACAAATGATAGTCCTTATACCTCAACTAAACAGCCAGCTGGTGCATTTTCTGGTCTTATCAATTCACTTATGGCACAAGGTTTGATCTCATTGATTGGACCACCCGCTGTTCAGGATTCTGTTGGAACTGAGTTTAATCCAGATATTCTGAAGATCCGGCATGAGTCTGCAATTAGTGCTTTATATTTTGACCTCCCTCGACAATGCACAACTTGTGGCCTCCGATTCAAGTGTCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTGACTAAGAATCGGATGTCTAAAAGTCGTAAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGAATGTGGCTTAGTGGTGCGGAGGCATTGGGAACTGAAGCAGTACCTGGTTTTTTGCCAACTGAAACGATGGAGGAAAATAAAGAAGATGAAGAGATGGTTGTGCCAGCTGATGAAGATCAGAATACATGTGCATTATGTGGAGAGCCTTTTGAAGAGTTTTATAGTGATGAAACTGAGGAATGGATGTTTAAAGGAGCTGTATACCTAAATGCGCCCAAGGGAGGAGTGGCAGACATGGATAGGTCGCAGTTAGGTCCAATTGTTCATTCTAAATGCAGATCTGAATCTAGTGCTGTTCCCACTGAAGAATCTAGACAGGATGACGGGGACGCTAATGAAGAGGGTAGTCAAAGAAAACGAATGCGGATTTGA 2664 0.4369 MGSQRLLLSRENPRPLGFPPGRVLPSAAAKSIPNEMAPKPLASSILERFKALLKQRDDEQRALSDDDVLPPSTDEIVQLYEIVLSELTLNSKPIITELTIIAGDQKEHGRGIADAICDRIIEVPSEHKLPSLYLLDSIVKNIGGEYVGYFSSRLPEVFCVAYRQVQPNLHHAMRHLFGTWSAVFPPSVLRKIEVQLRFSQAVNNQNVSSSINPPRVSEATQRTHGIHVNPKYLRQLENSTMDTDGGEMLDSTGSMEHTNFGVGANKMHQASISRHGKQYSGDGLSQFQFSTNGHQRQNPRALIDAYGSDKRTEISSNKPLVEPLDINGIDNKVVSTSWQNTEEEEFNWEDMSPTLVEHKRSNGVLPSSIILSRERSSGIVAANTAALGQDTRSGWNGGGSLGQITGLHNHLNHGLGSHPPHDALKISHHLPNSSHHLVNIRGRARNAHLSHIDSIPITKVSSYGLEIRPPTLPASFRARPPVNVHATRPPSLNPIFSLQKHVRSQFEAINSSNTILDQGPTKSSFMPEQLLDSDENSNISKLTFRQIPNQLSGLISSNPQNRGQALQPQTFPSQDVRESYSELQAPAASQFSHGGSLQRHGAAISATVSMSLPIGQFPLPVQNIRKNVFPMQQGALPPSFSGPCPPSQVMPHTNDSPYTSTKQPAGAFSGLINSLMAQGLISLIGPPAVQDSVGTEFNPDILKIRHESAISALYFDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSERMWLSGAEALGTEAVPGFLPTETMEENKEDEEMVVPADEDQNTCALCGEPFEEFYSDETEEWMFKGAVYLNAPKGGVADMDRSQLGPIVHSKCRSESSAVPTEESRQDDGDANEEGSQRKRMRI 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0625 887 FunFam polyadenylation and cleavage factor homolog 4 69 197 - -
Prci14g0625 887 MobiDBLite consensus disorder prediction 1 22 - -
Prci14g0625 887 ProSiteProfiles CID domain profile. 72 200 IPR006569 -
Prci14g0625 887 MobiDBLite consensus disorder prediction 860 887 - -
Prci14g0625 887 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 60 877 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Prci14g0625 887 Pfam CID domain 86 191 IPR006569 -
Prci14g0625 887 SUPERFAMILY ENTH/VHS domain 71 197 IPR008942 -
Prci14g0625 887 SMART 558neu5 75 197 IPR006569 -
Prci14g0625 887 MobiDBLite consensus disorder prediction 851 887 - -
Prci14g0625 887 ProSitePatterns Zinc finger C2H2 type domain signature. 721 741 IPR013087 -
Prci14g0625 887 Gene3D - 68 197 IPR008942 -
Prci14g0625 887 CDD CID_Pcf11 77 197 IPR047415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0625 Prci-Chr14 5303468 5311839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0625 659 886 C2H2 Transcription Factor Family AT4G04885 72.807 3.02e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0625 K14400 - gmx:100794796 986.867