LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g0610	ATGTCTTTGTGGCTAAAAGATTATAGATTTTTGGCCATGTTTTTCTTCATCTTTCCCATCTTTTTTTTCCAACTTGTCTCTGGTTCAGACCCTCTCTACACTTGGTGTCCACCAGAATTCCAAAATTACACACTAAACTCTACATTTCATAACAATCTTGAGCTTCTTCTAGAGTCACTTTCCTCTAGCATTTCAGTCTCAGGTTTCTACAAGACATCCATTGGATATGACCCAGATAAGGTCTATGGACTGGCACTATGCAGAGGAGACATAAACTTGAACTCCAAAATCTGTAAGGACTGCGTTGAGAAAGCAAGCCAAGATATACTCAAGTTATGCAGGAGTCAAGATGCTATGATATGGTATGAGCTTTGTCATGTAGGATACTCCTTTCAGATGCTTACTTCAAGAAAGGCTTACGCTGAGAAGTATCTAGATGAAAATAATCAGGCAAAGAATGTGTCGGATCCTGATCGATTCAGAATTTTTCTGATGTATCTAATGAATAAGCTGTCCAATGAAGCTGCATTTTTTCCTTCCAAGAACAAGTTTGCTTCTGGGGAAGTTGAATTTTCTCAGGAAATTACAATTTATGGTCTAATACAATGCACAAGAGACATTTCTGAAATATCATGCCATGAATGTTTGAGTTCTGCGCTCCAGGAACTTGAAGCTTGTTGCTCAGACCGTCAAGGTGGGATAGTTCTTAGTCAAATATGCAATGTGAGGTTTGACTTGTATCAGTTCTTCAATACTTCTTCTCAGTACCTTCCGTCTAAAGGAGGGAAAGGGAAGACATGGATGCTTGTGGTGATTATATTTTCATCAGTGTTCATATTAGCAGTTCTTATTGGTTTCTGCATTGCCTATCTCCTTAAAAAACAAGGGAAAGACAAAGATAACAAAAAAGGCGAAAAGATTCAACTGCAACAATTGGTGAGCCCCTTGAGTACAACAAATACACATGATGGAGAATCAATTAGTTCTGAAGAACTTTTGTTCATGAGTTTTGGAACAATTAAGGTAGCCACTGACGACTTTTCTGATTCAAACAAGCTAGGACAAGGAGGTTTTGGTGCTGTGTACAAGGGTATATTAAATGATGGCCAGGAAGTAGCAATCAAGAGGCTTTCAACAGGATCTGAACAGGGCTCAGATGAATTCACAAACGAGGTTCTGCTGATACTGAAACTTCAACACAAGAATTTAGTGAGGCTTCTAGGATTCTGTTTAGATGGAGAAGAAATGCTTCTTGTTTATGAATTTTTGCCTAATGGCAGCCTTGATGCTGTCCTTTTCGATCCAAGGCGACGAGCACAACTAAGCTGGATTAAACGTGTTGATATAATAGGTGGAATAGCAAGGGGGATTCTTTATCTTCATGAAGATTCTCGACTAAAAATAATTCATAGAGACTTGAAAGCAAGTAATATATTATTAGACTATGACATGAACCCAAAAATCTCAGACTTTGGAATGGCAAGAATATTTTCAGGAGCTGAAGGTGAAGCTAATACTGCTACTATAGTTGGCACATATGGATACATGGCTCCAGAATATGTTATGGAGGGACTATATTCCATAAAATCAGATGTTTTTAGTTTTGGAATGTTGTTGCTTGAAATTATTACTGGGAGACGCAATACAGGTTTCTCTCACTCTAAACATGCACATAACCTTCTGGCTTATGCATGGCATCTATGGAATGAGGGAAATACAGTGGAATTAATGGACCCTCTAGTAGCTGATTCATGCCCTGAAGATCAGTTTCTAAAATACATGCATGTTGGATTATTATGTGTTCAAGAAGAAGCATATGAAAGACCAACCATGTCTTCTGTTGTTTTGATGTTGAAAAGTCAATCCCCAACACTTGGTCAACCCCAAGGGCCACCCTTCTGTGAGGGAAGAATCACTGGTAGTGATCACAATGAGGCTGAAAATGAACAATGCTCCGTCAATAACTTGACAGTTTCCGATATACTGCCCCAGTGA	1995	0.3875	MSLWLKDYRFLAMFFFIFPIFFFQLVSGSDPLYTWCPPEFQNYTLNSTFHNNLELLLESLSSSISVSGFYKTSIGYDPDKVYGLALCRGDINLNSKICKDCVEKASQDILKLCRSQDAMIWYELCHVGYSFQMLTSRKAYAEKYLDENNQAKNVSDPDRFRIFLMYLMNKLSNEAAFFPSKNKFASGEVEFSQEITIYGLIQCTRDISEISCHECLSSALQELEACCSDRQGGIVLSQICNVRFDLYQFFNTSSQYLPSKGGKGKTWMLVVIIFSSVFILAVLIGFCIAYLLKKQGKDKDNKKGEKIQLQQLVSPLSTTNTHDGESISSEELLFMSFGTIKVATDDFSDSNKLGQGGFGAVYKGILNDGQEVAIKRLSTGSEQGSDEFTNEVLLILKLQHKNLVRLLGFCLDGEEMLLVYEFLPNGSLDAVLFDPRRRAQLSWIKRVDIIGGIARGILYLHEDSRLKIIHRDLKASNILLDYDMNPKISDFGMARIFSGAEGEANTATIVGTYGYMAPEYVMEGLYSIKSDVFSFGMLLLEIITGRRNTGFSHSKHAHNLLAYAWHLWNEGNTVELMDPLVADSCPEDQFLKYMHVGLLCVQEEAYERPTMSSVVLMLKSQSPTLGQPQGPPFCEGRITGSDHNEAENEQCSVNNLTVSDILPQ	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g0610	664	Pfam	Protein kinase domain	348	556	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g0610	664	FunFam	Cysteine-rich receptor-like protein kinase 10	144	249	-	-
	Prci14g0610	664	ProSitePatterns	Protein kinases ATP-binding region signature.	353	375	IPR017441	GO:0005524
	Prci14g0610	664	FunFam	Liguleless narrow1	423	626	-	-
	Prci14g0610	664	Gene3D	-	31	133	IPR038408	-
	Prci14g0610	664	Gene3D	-	141	249	IPR038408	-
	Prci14g0610	664	SMART	serkin_6	347	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g0610	664	CDD	STKc_IRAK	353	619	-	-
	Prci14g0610	664	ProSiteProfiles	Protein kinase domain profile.	347	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci14g0610	664	Gene3D	Transferase(Phosphotransferase) domain 1	423	626	-	-
	Prci14g0610	664	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	468	480	IPR008271	GO:0004672\|GO:0006468
	Prci14g0610	664	ProSiteProfiles	Gnk2-homologous domain profile.	142	249	IPR002902	-
	Prci14g0610	664	Pfam	Salt stress response/antifungal	39	130	IPR002902	-
	Prci14g0610	664	Pfam	Salt stress response/antifungal	152	246	IPR002902	-
	Prci14g0610	664	Gene3D	Phosphorylase Kinase; domain 1	309	422	-	-
	Prci14g0610	664	FunFam	Cysteine-rich receptor-like protein kinase 10	310	422	-	-
	Prci14g0610	664	ProSiteProfiles	Gnk2-homologous domain profile.	31	134	IPR002902	-
	Prci14g0610	664	SUPERFAMILY	Protein kinase-like (PK-like)	332	634	IPR011009	-
	Prci14g0610	664	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	42	660	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g0610	Prci-Chr14	5150033	5153187	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g0610	17	633	Receptor kinase-like Gene Family	AT4G05200	42.768	2.24e-168	496

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci14g0610		Pkinase	4.9e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g0610	-		-	pcin:129293128	792.727