Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0583 ATGCTTGTCCCGATTGCAATGGCTGCAGCTTTTTTGGGTTTTGCAACTTACGTATGTTTTCACTGGAAAAGAAAACTTAAAGGGGGAGAAACAACTGATGAAATTCTGATACAGAAGTTGGAGAATTCAAAGAAGCCCCACTTTAAAGAGAAAGGAACCGCGAAAGATGAGTACAACAATGGAGGAGTTCAAAACTATAGTTTGAAGACCATTAAGGTCGCAACAGACTATTTCTCAGAAGAAGCCAAGCTAGGGAAAGGAGGATTTGGACTCGTTTTCAAGGGGAAGTTGAGTAATGGCAAGGAGATAGCAGTTAAGAGGCTTTCATTCAAATCAGGGCAAGGCCTTGAAGAGTTCAAGAATGAAGTGACATTGATAGCAAAACTTCAACACAAAAATCTTGTGAGGCTTTTGGGGTTCTGTCTGGAAGAAAATGAAAAGCTTCTGGTCTATGAATACATGCCCAACAATAGCCTTGATACCTTCTTGTTTGATCCAATAAAACGTCAACAACTAGATTGGTCTAAGAGGAGGAGTATTATAAAGGGAATTGCCAGAGGACTCCTGTATCTGCATGAGGACTCAAGGCTAAAAATTATCCATAGAGATCTAAAAGCAAGCAATGTGTTACTAGATGAAGAGATGAATCCAAAAATATCAGATTTTGGAACTGCTAGAATTTTTGGCAGCAATCAAATTCAAGCTAGTACTGAAAGAGTTATTGGCACATATGGATATATGGCACCTGAATATGCTTTAGAGGGATTATTTTCCATCAAGTCAGATGTTTACAGCTTTGGTGTCATCATGCTAGAAATTATCAGTGGAAAAAGAAACACCGGCTTCTACCAACCAGAACGTGGTTTGAGTCTTCTCTCCCATGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGCGGAGCGTCAATTGGTCAACACTTGCCTGGACAAGGATGAAGCTTTGAGATGGATCCACATTGGGCTTCTATGTGTTCAAGAGAACCCACAAGATAGGCCCACCATGTCATCAGTTGTTCTCATGCTAGCAAGTTCCAGCAATCTTCCTTTCCCATTTGCTCCTCCATTTTCAGTCGGCAGATTCTTCGCTGCTTTTCAGTCCTCCACAACTGTTTCCACTAAGAAAGTTTCATGTGATTGTTGA 1167 0.4096 MLVPIAMAAAFLGFATYVCFHWKRKLKGGETTDEILIQKLENSKKPHFKEKGTAKDEYNNGGVQNYSLKTIKVATDYFSEEAKLGKGGFGLVFKGKLSNGKEIAVKRLSFKSGQGLEEFKNEVTLIAKLQHKNLVRLLGFCLEENEKLLVYEYMPNNSLDTFLFDPIKRQQLDWSKRRSIIKGIARGLLYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARIFGSNQIQASTERVIGTYGYMAPEYALEGLFSIKSDVYSFGVIMLEIISGKRNTGFYQPERGLSLLSHAWRLWNEGKGLELAERQLVNTCLDKDEALRWIHIGLLCVQENPQDRPTMSSVVLMLASSSNLPFPFAPPFSVGRFFAAFQSSTTVSTKKVSCDC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0583 388 ProSiteProfiles Protein kinase domain profile. 78 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0583 388 SUPERFAMILY Protein kinase-like (PK-like) 60 350 IPR011009 -
Prci14g0583 388 FunFam Uncharacterized protein 154 355 - -
Prci14g0583 388 SMART serkin_6 78 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0583 388 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 371 - -
Prci14g0583 388 FunFam Cysteine-rich receptor-like protein kinase 10 39 153 - -
Prci14g0583 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Prci14g0583 388 Gene3D Transferase(Phosphotransferase) domain 1 154 356 - -
Prci14g0583 388 CDD STKc_IRAK 84 350 - -
Prci14g0583 388 Gene3D Phosphorylase Kinase; domain 1 51 153 - -
Prci14g0583 388 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Prci14g0583 388 Pfam Protein tyrosine and serine/threonine kinase 81 348 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0583 Prci-Chr14 4726354 4729220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0583 69 366 Receptor kinase-like Gene Family AT4G23230 60.870 2.55e-135 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci14g0583 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0583 - - pcin:129293336 628.632