Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0516 ATGGAGGCTTCTGGGAGGATTTCTGAAGAGTGGAGTTCTCTTAGTGGATTATACACAGCTGAGGAAGCTGATTTTTTGAATCAACTTCTTGGTAGCAACTGTTCAGTCCCAGAAGGGCTAGTATATGAAAATTCCACTTTGGAATTTCCATATGCATTTTGGCCTGGACAAGAATCAACAGTTGTGAGCGTGGCAGGCATCAACAACAACACTACATATTTTCCTTCCAGTGATGCTAATGCTAGCGCTAATTTTTTCTGTTTCTCACAAGGCAATAGCTCCAGCACTGATAGTGGTGTTAACTACCACCCTAATGATCCATTAACCAATTGTGATTCTGTGTCTATGGATTTTTCTCTGGGTAATGCCAAACTTGTCCTGTATAGTGTTCAAAGCAATGACCATTTGAGCCAACAGATAAATGAAAATAATACCGATGAAGAGTCAGGTCTGGACCCAGTTAAAAGGGTTCTTGCTGCTGATGACAAGACCTTTCAGGCTAATCAGGAATTTGAAGCACTTGTTTGTTCTGAACCAGCTGACAAGGGTACAAGCACCAATCCGGAGAAGTCAGAGAAAAGGTCTAGGAGCTCATGCGAGGTGTCGAAGAACAAGAGGAATGTTAAATCAAAGAAGAATGCAAAATCTGAATCTATGCGCAAAAATGAAGAAGATGGGAGTTTTCAGAGGCAGAGCTCGAGCAGTTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCTAAACGTGGGGTCCACTTCATGTTCAAGTCCTAAAACTTCTGCATCTCTCAAGTCTAATGGCAAATCAATGTCTGCTAAAAATCCTGCCACTGATCCACAGAGCATATATGCAAGAAGAAGAAGAGAAAGAATAAACGAAAGGCTGAGAATTCTACAGAACCTTGTCCCCAATGGAACTAAGGTGGATATAAGCACCATGCTTGAAGAAGCAGTTCAATATGTGAAGTTTTTACAGCTTCAAATAAAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCTATTGCTTACAATGGATTGAACATTGGACTAGACCTTAACATCACACCTACCAAGCAATCATAG 1089 0.416 MEASGRISEEWSSLSGLYTAEEADFLNQLLGSNCSVPEGLVYENSTLEFPYAFWPGQESTVVSVAGINNNTTYFPSSDANASANFFCFSQGNSSSTDSGVNYHPNDPLTNCDSVSMDFSLGNAKLVLYSVQSNDHLSQQINENNTDEESGLDPVKRVLAADDKTFQANQEFEALVCSEPADKGTSTNPEKSEKRSRSSCEVSKNKRNVKSKKNAKSESMRKNEEDGSFQRQSSSSCCSEDDSNASQELNVGSTSCSSPKTSASLKSNGKSMSAKNPATDPQSIYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPTKQS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0516 362 MobiDBLite consensus disorder prediction 228 279 - -
Prci14g0516 362 FunFam Basic helix-loop-helix transcription factor 277 334 - -
Prci14g0516 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 341 IPR036638 GO:0046983
Prci14g0516 362 Gene3D - 275 333 IPR036638 GO:0046983
Prci14g0516 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 276 325 IPR011598 GO:0046983
Prci14g0516 362 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 131 334 IPR045843 GO:0003700|GO:0006355
Prci14g0516 362 MobiDBLite consensus disorder prediction 176 285 - -
Prci14g0516 362 SMART finulus 282 331 IPR011598 GO:0046983
Prci14g0516 362 MobiDBLite consensus disorder prediction 185 227 - -
Prci14g0516 362 Pfam Helix-loop-helix DNA-binding domain 286 326 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0516 Prci-Chr14 4013665 4015644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0516 1 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.740 5.34e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g0516 HLH 8.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0516 - - pcin:129292046 669.077