Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0513 ATGGCTTTGGAGGCTCTGAATTCTCCTACTAGTACTCCCAATTCAATGTTCAGTGAAGATGATCTTCACTCGCTCGAGGCTTGGACTAAGGGAAAGCGATCTAAACGTCACCGTTTTGATCAGAATCAGCCTTCCGCTGAGGAAGAGTACCTCGCTATCTGCCTCCTCATGCTCGCTCACAGTGGCGGCAACAACAACAACGATAACACCGCCAATACGAAGTCGTCTTCCCCCCCTGTTCCTTCCTCTTCTCCTCCTCCAATGAAGCTTTCTCATAAGTGCTCTGTTTGTAACAAGTCCTTCCCGTCGTACCAGGCGCTCGGAGGACACAAGGCCAGCCACCGCAAGTCCTCCTCCTCCGATCATCACCCTAACGCCGACAATTCCTCCGCCTCCATCTCCACCGCCTCGATCACCGCCACCGCCACTGTGGGCGGCAGTGGGAAGTTGCATGAGTGTTCCATCTGTCACAAGGCCTTCCCGACAGGTCAAGCCCTCGGCGGCCACAAGCGCTGCCACTATGACGGTGGCAACGCCAACAACAGCGGTCCCGGTGGAACGACGGTGATCACGTCGTCTGAGGGGAACACCTCATCAGTCACCCACAGCCACCGTGGATTTGACCTGAACCTCCCTGCTCCTTTGACGGACATCTCCCTGGCAGGGATCTTCGGCGCCGCCGGGAAGAGTGTGAAGATTGGAGAAGAAGAGGTGGAGAGCCCGTTGCCGGCGGCTGCCAAGAAGCCTCGTTTCTTCATGGATTGA 765 0.5647 MALEALNSPTSTPNSMFSEDDLHSLEAWTKGKRSKRHRFDQNQPSAEEEYLAICLLMLAHSGGNNNNDNTANTKSSSPPVPSSSPPPMKLSHKCSVCNKSFPSYQALGGHKASHRKSSSSDHHPNADNSSASISTASITATATVGGSGKLHECSICHKAFPTGQALGGHKRCHYDGGNANNSGPGGTTVITSSEGNTSSVTHSHRGFDLNLPAPLTDISLAGIFGAAGKSVKIGEEEVESPLPAAAKKPRFFMD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0513 254 MobiDBLite consensus disorder prediction 65 91 - -
Prci14g0513 254 MobiDBLite consensus disorder prediction 106 133 - -
Prci14g0513 254 MobiDBLite consensus disorder prediction 183 203 - -
Prci14g0513 254 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 34 213 IPR044653 GO:0003700
Prci14g0513 254 Pfam C2H2-type zinc finger 151 175 - -
Prci14g0513 254 Pfam C2H2-type zinc finger 92 116 - -
Prci14g0513 254 Gene3D Classic Zinc Finger 90 173 - -
Prci14g0513 254 MobiDBLite consensus disorder prediction 1 19 - -
Prci14g0513 254 MobiDBLite consensus disorder prediction 1 21 - -
Prci14g0513 254 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Prci14g0513 254 SMART c2h2final6 92 114 IPR013087 -
Prci14g0513 254 SMART c2h2final6 151 173 IPR013087 -
Prci14g0513 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 173 IPR013087 -
Prci14g0513 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Prci14g0513 254 SUPERFAMILY beta-beta-alpha zinc fingers 92 173 IPR036236 -
Prci14g0513 254 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0513 Prci-Chr14 3974225 3975351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0513 1 251 C2H2 Transcription Factor Family AT1G27730 49.027 2.79e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci14g0513 zf-C2H2_6 3.9e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0513 - - gmx:100806788 247.669