Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0494 ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAACCCCTAATTATCTGGGGGACGATTCGTTGCCCGATAGATATCTTCATCTCGATATCAATAATCGTCGCCATCATCACAATCCACATGATTTCAGTGATGGTGAGACTCTCCGACGGTCCACGCCAACGCGACGGCTATTTCATCGTTTGTCCTACACGGAGCAAGAATCAGCTAGACTTGACCTTAGGCACAACCGTTCTCTTTCAAACACAGCCAATTCTGCTGAAGATGTAAGCAGTTTCAGGGGCCCTAGAGTGAATGGGAATGACAGGCTACCCATAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGTTGAGTGCAGCACCTCCCTCCAGAAACAGGCAAAGGGGTAGAATCTCTCTAGATATTGATGACATGAGGCATACGAACTTCAGGGATGAAGAGAGCAGTGAATCCTCAACTAGTCGTTTAGCTGAGGGTTTCCCATTAACTGACTTAACTTTACAAATGGAGAGGTCCCAACTCTTACAGGAAGTGAACAAAAAACCACCTGGACTCAACCAGGAGGCCATGGACCGTTTGCATATGGAAGTATTTAGCATCAGGGAAACACAAACGGAAGAATTGGAATCTAGAGTACTGCAGGATTGTGGCATATGCCTGGAAACTTTTCTTGATGGTGATAAGCTGATACGCTTGCCTTGTGGGCACAGATTCCATTCTGCGTGTTTGGATCCATGGGTTCGAAAATGTGGGGATTGCCCATTCTGTAGAAGAGGTATATTTTTAAACTAG 813 0.4637 MTSASELFYNRRYRLGRTPNYLGDDSLPDRYLHLDINNRRHHHNPHDFSDGETLRRSTPTRRLFHRLSYTEQESARLDLRHNRSLSNTANSAEDVSSFRGPRVNGNDRLPIAVVHARARLLQRLSAAPPSRNRQRGRISLDIDDMRHTNFRDEESSESSTSRLAEGFPLTDLTLQMERSQLLQEVNKKPPGLNQEAMDRLHMEVFSIRETQTEELESRVLQDCGICLETFLDGDKLIRLPCGHRFHSACLDPWVRKCGDCPFCRRGIFLN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0494 270 MobiDBLite consensus disorder prediction 125 163 - -
Prci14g0494 270 MobiDBLite consensus disorder prediction 81 97 - -
Prci14g0494 270 MobiDBLite consensus disorder prediction 81 101 - -
Prci14g0494 270 SMART ring_2 223 263 IPR001841 -
Prci14g0494 270 SUPERFAMILY RING/U-box 222 268 - -
Prci14g0494 270 PANTHER SI:CH211-59O9.10 71 267 - -
Prci14g0494 270 CDD RING-H2_PA-TM-RING 222 264 - -
Prci14g0494 270 ProSiteProfiles Zinc finger RING-type profile. 223 264 IPR001841 -
Prci14g0494 270 MobiDBLite consensus disorder prediction 136 159 - -
Prci14g0494 270 Pfam Ring finger domain 222 264 IPR001841 -
Prci14g0494 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 267 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0494 Prci-Chr14 3855066 3857788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0494 1 267 C3H Transcription Factor Family AT1G49850 37.906 4.25e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0494 - - pcin:129293386 546.199