Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0493 ATGGGATACCTTCTTTGGAAGCAGATCCGTTTTCAACGCGCGCACAGAACTTACGCGTCAACTATAAATGGCGCCACTTTAGCCCGTCGTCTTCGTTCTCACGCGGCAATAACCCCCACCTTCCTTCTGCTTGGCTGTGGAAGCGACGGTCTTCTCTGGCACTCCGACTTGAAGCCTCATGCCTCCGGTGATTTCTCCATCGCCGTTGCTCAAGCCAATTCCTGCCTCGAAGATCAGAGCCAAGTCTTTACGTCTCCCTCCACCACCTACGTCGGTGTCTACGATGGCCATGGCGGTCCTGAAGCTTCTAGATTCGTTAACAAACGCCTCTTTCCTTGTTTACAAAAACTTTCCGCTGAAAATGGGGGGTTATCAGTGGATGTGATAAAAAAGGCGTTTCATGCAATTGAGGATGATTTCTTGAGCTTGGTGAAGCAATCGTTGCACACTACTCCCCGAATTGCTTCGGTAGGATCGTGTTGTCTTCTTGGTGCAATCTCTGATAATGTATTATATGTTGCGAACCTTGGTGATTCTAGAGTAGTTCTTGGCCGGAGAGTTTTTGGGGACTACAAGCATCCGGTGGTGGCACAAAGACTGTCAACTGATCATAATGTCTCTGTTGAGGAGGTGAGGAGAGAGGTCAAATCTCTTCATCCTGATGATGAACACATTGTGGTTTTTAGTCGTGGAACTTGGAGGATTAAAGGCATTATACAGGTGTCAAGATCTATAGGTGATATGTATCTCAAGAACCCTGATTGTTCTAGAGACCCACTTTTTCAGAAATTTGGTAACCCCATTCCTTTGAAACGTCCTGTAATGACGGCTGAACCATCAGTCATTGTCAGAGATCTTGAGTCGCAAGATTTGTTTCTGATATTTGCATCAGACGGCCTTTGGGAACAATTAACTGATAAAGAAGCAGTTGAAATTGTGTACAAATATCCAAGAGCTGGCATTGCCATGAGGTTGGTGAGAGCTGCACTTGATTCAGCAGCAAGGAAGAGAGAGATGAGATATAATGACATGAAGAAAATTAACAAGGGAGTGAGAAGACTTTTCCATGATGACATTACTGTTATAGTAATGTATCTTGATCACCGAAATGGGTCTACCTACAAAGTTAAGAAAAATGCTCTCAGTTCCATAAGTGCTCCTTTGGATATTTTCTCCCTGAACGCAGACGAAGCTGAACAGAGTGTCCTTCGTACAGCTTCCTGA 1224 0.4485 MGYLLWKQIRFQRAHRTYASTINGATLARRLRSHAAITPTFLLLGCGSDGLLWHSDLKPHASGDFSIAVAQANSCLEDQSQVFTSPSTTYVGVYDGHGGPEASRFVNKRLFPCLQKLSAENGGLSVDVIKKAFHAIEDDFLSLVKQSLHTTPRIASVGSCCLLGAISDNVLYVANLGDSRVVLGRRVFGDYKHPVVAQRLSTDHNVSVEEVRREVKSLHPDDEHIVVFSRGTWRIKGIIQVSRSIGDMYLKNPDCSRDPLFQKFGNPIPLKRPVMTAEPSVIVRDLESQDLFLIFASDGLWEQLTDKEAVEIVYKYPRAGIAMRLVRAALDSAARKREMRYNDMKKINKGVRRLFHDDITVIVMYLDHRNGSTYKVKKNALSSISAPLDIFSLNADEAEQSVLRTAS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0493 407 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Prci14g0493 407 Pfam Protein phosphatase 2C 84 333 IPR001932 -
Prci14g0493 407 SMART PP2C_4 58 364 IPR001932 -
Prci14g0493 407 CDD PP2Cc 69 366 IPR001932 -
Prci14g0493 407 ProSiteProfiles PPM-type phosphatase domain profile. 64 366 IPR001932 -
Prci14g0493 407 FunFam Probable protein phosphatase 2C 42 55 374 - -
Prci14g0493 407 Gene3D - 55 376 IPR036457 -
Prci14g0493 407 PANTHER PROTEIN PHOSPHATASE 62 364 IPR015655 GO:0004722|GO:0006470
Prci14g0493 407 SUPERFAMILY PP2C-like 73 368 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0493 Prci-Chr14 3851262 3853703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0493 49 387 PP2C-type Phosphatase Gene Family AT3G51370 52.738 1.11e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0493 K01102 - rcu:8272244 539.265