Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0459 ATGCAAGAGGAAGATGAATTGGAACCCAAAATAGGGAGGGAGTTTGAAAATTTAGATGAGGCATGGGAGTTTTGGACAGAATATGGTAAAAGAATTGGATTTGGAGTTAGAAAGGGTACTTCTACAAAGAGTAGAGCAGACAAATCCATTATTATTACATATAGATTTTTATGTTGCAAGGAAGGTCTGCGAAGGAAAAATGAAAAAAGGGCATATGCTTCTACACATCGACCAGAGACAAGGACTAATTGTAAGGCAAGAATGGTAGTATCTCGTGTTGGCCAAAAGTTTAGAATCACTGTGATTGATAGAGAACATAATCACCCACTTCACACAAAAGACACAGTAAGCTTGTTACCATGTCAGAGAAATATATCAGAAGCTCAAGCCTATGAAATGGATCTTGCAGAAGAATCTGGACTTGAACCTAGGGATACTTTTGACTTAATGAGTACATATGCCGGTGGTCCAGAAAATCTTGGTTATACAATGACAGATGTAAAGACTTACTTGATGTGCAAAAGGAAGAGACATATGAAGTTTGGTGAGGTGGGGTGTCTACTTGAATACTTTCAGAAACAAATTGAAGAAAATCCAGCATTCTACCATAAATATCAATTGGACCCTGATCAACACATCACTAATGTTTTTTGGGCCGATGCTCGCATGCTAATAGATTATGCACATTTTGGTGAGGTTGTATCACTTGATACAACATATAGCACAAATCAGAATCATAGACCCCTTGCACTATTTTCTGGCTTCAATCATCATAGAAGTGTGGTCATTTTTGGAGCAGCACTATTATATGATGAGACAATTGAGTCTTTTAAATGGTTGTTAGAAACATTTTTGGATGCTCATATACAAAAAAAGCCTCAAACTGTGTTTACAAACCAAGATCAAGCGATGGCAAGAGCATTGTGCGAAGTTCTTCCCAATACAAAACATTGTTTGTGTAGTTGGCATTTATTAAAAAATGGTGTTAAACACCTTGGGAACCTCATGAAAGATGGGTCACATTTTTTAACTGATTTCAAGAAATGCATGTTTAATTATGTTGATGTAGAGAAGTTTGAAGAAGCATGGAGCCAATTATTATCTTCTTATAATGTTCATGAAAATGGATGGTTGAAGTCTACTTATGATATTAAGGAGAAATGGGCTTGGTGCTATGTGAAGGAAACATGCACACTAGGCATGAGGAGCACACAGATTAGTGAAAGTGTGAATGCTGATGTGAAGAGATGTACAAAGCCAAAATTGGATATCAAACGATTTTTTAAAAGGTTTGACAAGGTTGTGGCAAAGAAGCGATACAAAGAAGTGGAACTTGAGTATGAATCTCGACAAAAGATTCCAAGGATGGTTAATCAAAGTGCACCTATTCTACGCCAACTTGTGCAAGTTTATACCCCTACTGTTTTTGACATGTTTCAAGAGCAATGGGATCTCCAATTCTCTGTAGAATTAATTACACGTGATGAGAAAGAGTCATTATTTGTATATATTGCCCGTATGATTGATCAGGAAGGGGAATGGAGAGTTGAGTTCAAACCTGATACCCATGAAATTTTTTGTACTTGTCAAAAGTTTGAGTCCACGGGAATATTTTGTTGTCATGCATTAAAAGTGTACGAGTCAAAGGATGTAAGAGTTATGCCTGACCAGTATATTCTAAAGCGTTGGACTAAGGAAGCAAGGTTTGGTGTTGTCCATGATGTTAGAGGAAATGAGATTCAAGTAGATCCTAGACTTGACATCACGCAGAGGTATAGACAGTTAATGCTTATGATGGGAAGATTGGCATCCAAGGCTGCTAAGACACTTGAGGGATTTACTTGTGTTCAGAGATGTGTCATTGAGTTAGAAAATCATATTCCTAATGGTAATGAAAATGATACTTCTGAACTAGTCATAGAGTCACAAAATATGCCAAAGGGGTTCAAAAAAAGAGATGGAAAATCAAGCAAGAGACGTTGGAAAGGTTGGGAAGAGAAGAATTTAAAAACAAGAAGAAGAGTTGTATCAAAGGACTCTCAAGAAGCTTCACCATATAAGAAGACATCAAAGGAAAAAGAAAAGGCCTCATCATCAAAAAGAAGAAGAAAGGATGATCAACTGAAAGATTTACAAGCTTCAGCAATTTCTTACTTGGAAGCTCCAACACAACCAGTACAAATACAAGATTCAACATTTTCATATGCAATCCCTCCGGTACAACATATTTTTTCACCCCCTACATCACAATCATTGTCATTTACAAGCTTATTGGTGGTATGA 2283 0.3684 MQEEDELEPKIGREFENLDEAWEFWTEYGKRIGFGVRKGTSTKSRADKSIIITYRFLCCKEGLRRKNEKRAYASTHRPETRTNCKARMVVSRVGQKFRITVIDREHNHPLHTKDTVSLLPCQRNISEAQAYEMDLAEESGLEPRDTFDLMSTYAGGPENLGYTMTDVKTYLMCKRKRHMKFGEVGCLLEYFQKQIEENPAFYHKYQLDPDQHITNVFWADARMLIDYAHFGEVVSLDTTYSTNQNHRPLALFSGFNHHRSVVIFGAALLYDETIESFKWLLETFLDAHIQKKPQTVFTNQDQAMARALCEVLPNTKHCLCSWHLLKNGVKHLGNLMKDGSHFLTDFKKCMFNYVDVEKFEEAWSQLLSSYNVHENGWLKSTYDIKEKWAWCYVKETCTLGMRSTQISESVNADVKRCTKPKLDIKRFFKRFDKVVAKKRYKEVELEYESRQKIPRMVNQSAPILRQLVQVYTPTVFDMFQEQWDLQFSVELITRDEKESLFVYIARMIDQEGEWRVEFKPDTHEIFCTCQKFESTGIFCCHALKVYESKDVRVMPDQYILKRWTKEARFGVVHDVRGNEIQVDPRLDITQRYRQLMLMMGRLASKAAKTLEGFTCVQRCVIELENHIPNGNENDTSELVIESQNMPKGFKKRDGKSSKRRWKGWEEKNLKTRRRVVSKDSQEASPYKKTSKEKEKASSSKRRRKDDQLKDLQASAISYLEAPTQPVQIQDSTFSYAIPPVQHIFSPPTSQSLSFTSLLVV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0459 760 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Prci14g0459 760 MobiDBLite consensus disorder prediction 641 707 - -
Prci14g0459 760 Pfam MULE transposase domain 233 327 IPR018289 -
Prci14g0459 760 SMART 26again6 525 552 IPR006564 GO:0008270
Prci14g0459 760 Pfam SWIM zinc finger 524 549 IPR007527 GO:0008270
Prci14g0459 760 Pfam FAR1 DNA-binding domain 23 111 IPR004330 -
Prci14g0459 760 MobiDBLite consensus disorder prediction 658 707 - -
Prci14g0459 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 626 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0459 Prci-Chr14 3517477 3519830 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci14g0459 MULE 4.8e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0459 - - pcin:129293091 1533.85