Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0458 ATGACAATGGAGGCGTTGCAGGGAGAGGTGGATCGAGTCAAGGGTCCCTGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCGACGGCACGGCGCTCGAAATTGGTCGGCCATAAGCAAGGCGATCGCCGGACGATCTGGAAAGTCATGCCGGCTACGGTGGTGCAATCAGCTCTCACCGGATGTAGAGCGTGGCGCCTTCACTCCGGAGGAGGACGAGATCATCATCAAGGCACACGCCCAGTTCGGCAACAAATGGGCCGCCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCTGTCAAAAATCACTGGAACTCCACCTTAAAGCGCAAGTACTCATCACTGGTTCGTGACGTCGAAGATCCATCGCTCCAACTACCAACGAAGAAGCAGGCTACCGAAGATCGATCGCTGACGATTCCTTCCGTATTAGCGGGTCATTGTTACAGCCCGGGCAGCCAAACTGGATCTGATGTTAGTGACTCCGGTCATCAGGCAGTCTCTAATTCTCCGACTGTGATTCGGCCTGAATCGAGACCGCCGGACGCGAACCTGAACAACGATCTCTCAACAGAACTCACTCTGTCTCTTCCTGGAGCCAAGTCGAAGGAGTTAGGGAGGCTTAAAGATTCTAGCTCTATTACAGAGCATGAGGAAGCATTATCAACGTCGATATTATTATCAACGGAGAAGAAGCAGGGTGGAATCACGACTTTTGGGCCAGAGTTGCTGGCAGTGATGAAGGAGATGATAAGGATGAGGTGA 774 0.5336 MTMEALQGEVDRVKGPWSPEEDELLRQHVRRHGARNWSAISKAIAGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIIKAHAQFGNKWAAIAKLLNGRTDNSVKNHWNSTLKRKYSSLVRDVEDPSLQLPTKKQATEDRSLTIPSVLAGHCYSPGSQTGSDVSDSGHQAVSNSPTVIRPESRPPDANLNNDLSTELTLSLPGAKSKELGRLKDSSSITEHEEALSTSILLSTEKKQGGITTFGPELLAVMKEMIRMR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0458 257 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci14g0458 257 FunFam MYB transcription factor 14 65 - -
Prci14g0458 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci14g0458 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 60 IPR017930 -
Prci14g0458 257 CDD SANT 68 111 IPR001005 -
Prci14g0458 257 Gene3D - 67 141 - -
Prci14g0458 257 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Prci14g0458 257 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 14 217 - -
Prci14g0458 257 MobiDBLite consensus disorder prediction 152 192 - -
Prci14g0458 257 MobiDBLite consensus disorder prediction 152 178 - -
Prci14g0458 257 FunFam Transcription factor MYB44 68 114 - -
Prci14g0458 257 Gene3D - 13 65 - -
Prci14g0458 257 SMART sant 65 113 IPR001005 -
Prci14g0458 257 SMART sant 13 62 IPR001005 -
Prci14g0458 257 Pfam Myb-like DNA-binding domain 17 74 - -
Prci14g0458 257 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Prci14g0458 257 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0458 Prci-Chr14 3498859 3499788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0458 11 255 MYB Transcription Factor Family AT5G67300 48.134 8.09e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci14g0458 Myb_DNA-bind_6 2.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0458 K09422 - jre:108996080 250.366