Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0420 ATGCAAGGTAACAGAAGGACTCTTGGCTCCTTTCCAGCGATTGTAAGTATGTTGCAGGAGCCTAGTTCTAGTGGCTCTGATATGGATCCGCAGACTTCCTTGAATCACATGCAAAATCCAGTTGATGCTCGGCTGTCAGATTTTCTGGGATCCTCTGGTGAGAATGCATGTTTATGCACTAGTGATCCTGATGTTCAGAACTTTGGTGGATGGAATGCTGGTGAACCTAGTTCTAGTGTGAATCTTCATAGTCAAGTCAATAATGATGGGCTAAAAGCTGAACATGGTTGGTCTTCTTCATGTGGTGTTTCTACTGAGGATGTTCTAAGAACAGAAGAACGGCAGTTTGATCCAAATAATGTAACTTTCCCTGGCAGCTCAAATACTGACTTACGTGGAAATCAATCCAGAGTTCAGCCTTTCTTCTTGCAAGGTTCCAGCTCCAATCATAGAACCCAGAATGCGGCTTTAAATATGGGTTCCATTGCCAGCCCTGCTAATCATGGGAAAGGAACAGAACCTTGTAGCAGTGATAGTATTCACAATACATATGGATTCACTAGTAAGCATACATCATTTGGTAGTGCTTCCTGTGATCATGTAGGAACTTCATCTGGAAGCTCTGGTTACATTGTTGGGGGAGATAATGATAATTCAAGCTCTTCTTTAGTTAATTGGGGTTCTTCCTGCAAGAGAAAGGCTCTTGAAAGTACTTCTGGGCAGCTGTGTACTGGAGGAAGTTCAAGCTCTTTTCTAGAAGCTGAAAGCAGTTGCTGGCCTACTGGGACTTTCAATTCTAATAATGCTTCCAGCAGTTTAAATGTGTCTAGACCTTCTGAGAATGTTCTTGTTACTAATCCTCCAGTAGAGCAGGATCCAAGAAATGAGATGAGGCAACTAGCTTCTGATGCATTCCCTTTGATAGGAGTTATGGGAAATGTGAACAGGCCCTTGAGAAACTTTGACAGGAGGATGAATTATCCACAACGACAGGAATCTAGGCATTCTAATCATTCTTCTTCCCGCCAAAGACCTACCTCTCACCCATTTAATGATTCTCTAGAGCTAAGGTTAACAGCTGGAGTTACAGCAGCCAGTTCTGGCGCTCCTCAGTGTCAGTCACATTTTACGCACATCCCTGGTTTGCCAGGGAACACACATCCTTTTCCTTGGAGTGGAGCTTCTAGTTCAAGAGGAGCCGGTTCATCTACTTCTTATAACTCTGCAGAAAGGGAAGTTCGTGAAGAATTGAACTTTAGAATTTTTCCAAGAGACAATACAGAGCACCCCATCCTTGCACCTTCATCTTCTGGACTTGATCCTACAAGTTGGCATGTATCATCTGGTAATGTGAACAATTCTGGAAGTGTACCTCCTGCATCTTGGATTGGACCCAGTTCAAGTGTCAATTCATTAACTAATCCGAGCTGGATTGTTCCCCATGAAGTTCCAACACAGAGCCAGCAAAGATTATCAGAGTTCAGTCCCTGGTCCTTTTTTCCATCAATGAACTCAGTATCTGGCGTTCATAATGTTCATTCTGCCTCATCTTCTACTTCTTCCGGCCCTCCTTCCTTTATTCCAGACATGGGCAACCATCAATCATATCCAAGATTAGCATCATTGATGGAGAGAAGAGGTGATGAAGTTCTTAATGCACCCCATTCATTGCGGGCTTTAGCTGTTGACATTGAGGGGAGACGACGATTGATATCTGAGATTCGCCAAGTCTTAAGTGCAATGCGCAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCGTTCATATATCATGGTATGGCTGAACTTCATGATAGGCACAGGGACATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGCTGGCATTGGAGGAGCGCATTGGAGATGTGAGCACTGGATTGAGTGAGGATACCATTATGAAGTTGATGAAACATCGGATCTACGTGTCTGTAATGGCCGAGCCTTCAACAGATCTCGAACCTTGTTGTATCTGTCAGGAGGAATACACTGATGGGGAGGATGTAGCCTCACTAGATTGTGAACATGAATTCCACACCAACTGCATCAAGAAGTGGCTAAAGCAGAAGAACCTGTGCCCCATTTGCAAAACAACGGCCTTAGCAACATGA 2145 0.4387 MQGNRRTLGSFPAIVSMLQEPSSSGSDMDPQTSLNHMQNPVDARLSDFLGSSGENACLCTSDPDVQNFGGWNAGEPSSSVNLHSQVNNDGLKAEHGWSSSCGVSTEDVLRTEERQFDPNNVTFPGSSNTDLRGNQSRVQPFFLQGSSSNHRTQNAALNMGSIASPANHGKGTEPCSSDSIHNTYGFTSKHTSFGSASCDHVGTSSGSSGYIVGGDNDNSSSSLVNWGSSCKRKALESTSGQLCTGGSSSSFLEAESSCWPTGTFNSNNASSSLNVSRPSENVLVTNPPVEQDPRNEMRQLASDAFPLIGVMGNVNRPLRNFDRRMNYPQRQESRHSNHSSSRQRPTSHPFNDSLELRLTAGVTAASSGAPQCQSHFTHIPGLPGNTHPFPWSGASSSRGAGSSTSYNSAEREVREELNFRIFPRDNTEHPILAPSSSGLDPTSWHVSSGNVNNSGSVPPASWIGPSSSVNSLTNPSWIVPHEVPTQSQQRLSEFSPWSFFPSMNSVSGVHNVHSASSSTSSGPPSFIPDMGNHQSYPRLASLMERRGDEVLNAPHSLRALAVDIEGRRRLISEIRQVLSAMRRGENLRAEDYMLFDPFIYHGMAELHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDTIMKLMKHRIYVSVMAEPSTDLEPCCICQEEYTDGEDVASLDCEHEFHTNCIKKWLKQKNLCPICKTTALAT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0420 714 MobiDBLite consensus disorder prediction 389 408 - -
Prci14g0420 714 FunFam E3 ubiquitin-protein ligase MBR2 634 712 - -
Prci14g0420 714 MobiDBLite consensus disorder prediction 328 351 - -
Prci14g0420 714 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 154 712 IPR045191 GO:0061630
Prci14g0420 714 SMART ring_2 667 707 IPR001841 -
Prci14g0420 714 MobiDBLite consensus disorder prediction 365 380 - -
Prci14g0420 714 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 712 IPR013083 -
Prci14g0420 714 Pfam Ring finger domain 667 708 IPR001841 -
Prci14g0420 714 SUPERFAMILY RING/U-box 649 711 - -
Prci14g0420 714 MobiDBLite consensus disorder prediction 365 410 - -
Prci14g0420 714 MobiDBLite consensus disorder prediction 432 451 - -
Prci14g0420 714 ProSiteProfiles Zinc finger RING-type profile. 667 708 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0420 Prci-Chr14 3205130 3210628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0420 31 714 C3H Transcription Factor Family AT2G15530 37.115 8.88e-115 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0420 - K19041 gmx:100809024 899.042