Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0409 ATGATGGGGACCTCAAATAGATCTACATCAATAGGGTCTTCAGAATTGTCAGAGCAGAAGGACAAAGATACAACTGTTTCAAATGCAAACTTGCCTCAATGTCCTTTGAACCAGCAACCTAGTTCCTTGGTTGGTCCGGTCGCTATACTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGGTGTGCGCCCTGAAGATGTTGCTGGGAATGTAACAATGGCTTTGCGGGTGCATCCAATAATTAAAGGGGCTATTGTGATGTTTTCTGCTTATGGGGATTTCAATACTTTCCCCAGGCGACTCAGAGAGGGTTGCCAAAGAACTGGTGTTAAACTCACTGATGTTCCCAGTGGAAGAAAAAACGCTGCTGACAAAGCTATCTTGGTTGACATGTTCTTGTTTGCCCTTGACAACCAACCACCTTCTTCTATAATGCTGATATCTGGAGACATTGATTTTGCTCCTGCACTTCATGTTCTTGGTCAACGGGGATATACTATCATTCTTGCCGTCCCTGCTGAGGTTGGTATGCCAACTACCTTTAGCAGTGCTGGTAAATTTGTTTGGGATTGGCCTAGCATTGCTTGTGGAGAAGGTTTTGTGCCCTCCTTAAAGGCTCTGGTTCCACCTCATGCTGTTCCAACTGAGGTTGCTGGAGATCTTATAGGGTGCCACATAAATGGCAACTTTGATGGACTAAATGAAGAAGCTATTTTTTATGGAGGGATCTCACAGAACTACCATAACTCTAAGTGCTCCTCATTTGTGTCACAATCTCTGTCTGAATACAAAAGTGATGCATTGAACGCGTCATTCTTTCCAGCAGCTTTGAGGTCACATAGCCTACCATCCACTCTGAACGTTTCAGGAGGATCTATGCCATTTCCTACTGACCAAAATGAATGCCCATCATGGGTACAACCTGGGGATTTGAATGGTGTCAAGTGTCAGCTGGTAAAGTTGCTTGAACTTTCTGGAGGTTGTTTGCTTATGGCACAAGTTCTTCCGGAGTATCATAAATATTTCGGGAGGCCTCTCTCTGTGTCTAAATACGGTACACGCAAATTATTGAATCTTTTCAAGAAAATGGGCGATCCATTTTCTGTGGAAGGGAAAGGACACCAGAGATTTGTGTATCTTCAAAGCTGGAAGGCATGCCCAAATGTACCACCTCCTTTGTCTCAGGCAAACAATGATGAGAAAGGAAGAGGGATTCAGGAAGAGAATGCGGATAGTGCCTGTGCTGGTTGCTCTATAGGTGAAGAAAGAGTAGTCACAGAGGAGCATGATAAGAGAAGCAGCATAGAAAAGGATCACCGAGGGAAAGGAGCCAGAAGTGAAATTCATGACCGAATTCTTGAGCAATTCAAGCATGAGTTGCAAGAGATTCTCGTAATTTATTCTGGTCCAGTATTCATAGATTGTTTTGATGACATTTACCAGCTACGTTACAAGAAGCCCCTGGAATACCAGAGATTGGGCGTGGGCAAGTTAGAGGAATTGTTTGAGAAAGTGAGTGATGTGGTAGCGCTGCATGAGGAACCAGTAAGCAAGAGGAAGTTTCTGGTTGCTGTGGATGGTTAG 1584 0.4394 MMGTSNRSTSIGSSELSEQKDKDTTVSNANLPQCPLNQQPSSLVGPVAILWDIENCPVPSGVRPEDVAGNVTMALRVHPIIKGAIVMFSAYGDFNTFPRRLREGCQRTGVKLTDVPSGRKNAADKAILVDMFLFALDNQPPSSIMLISGDIDFAPALHVLGQRGYTIILAVPAEVGMPTTFSSAGKFVWDWPSIACGEGFVPSLKALVPPHAVPTEVAGDLIGCHINGNFDGLNEEAIFYGGISQNYHNSKCSSFVSQSLSEYKSDALNASFFPAALRSHSLPSTLNVSGGSMPFPTDQNECPSWVQPGDLNGVKCQLVKLLELSGGCLLMAQVLPEYHKYFGRPLSVSKYGTRKLLNLFKKMGDPFSVEGKGHQRFVYLQSWKACPNVPPPLSQANNDEKGRGIQEENADSACAGCSIGEERVVTEEHDKRSSIEKDHRGKGARSEIHDRILEQFKHELQEILVIYSGPVFIDCFDDIYQLRYKKPLEYQRLGVGKLEELFEKVSDVVALHEEPVSKRKFLVAVDG 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0409 527 MobiDBLite consensus disorder prediction 1 37 - -
Prci14g0409 527 CDD LOTUS 311 380 - -
Prci14g0409 527 MobiDBLite consensus disorder prediction 1 15 - -
Prci14g0409 527 ProSiteProfiles OST-type HTH domain profile. 452 526 IPR025605 -
Prci14g0409 527 PANTHER LIMKAIN B LKAP 25 269 IPR024768 GO:0005777|GO:0010468
Prci14g0409 527 Pfam NYN domain 46 178 IPR021139 GO:0004540
Prci14g0409 527 ProSiteProfiles OST-type HTH domain profile. 310 382 IPR025605 -
Prci14g0409 527 Pfam OST-HTH/LOTUS domain 453 515 IPR025605 -
Prci14g0409 527 Pfam OST-HTH/LOTUS domain 312 377 IPR025605 -
Prci14g0409 527 Gene3D - 447 519 IPR041966 -
Prci14g0409 527 Gene3D - 310 380 IPR041966 -
Prci14g0409 527 CDD LOTUS 453 515 - -
Prci14g0409 527 CDD PIN_limkain_b1_N_like 46 172 - -
Prci14g0409 527 Gene3D - 46 189 - -
Prci14g0409 527 MobiDBLite consensus disorder prediction 23 37 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0409 47 197 C2H2 Transcription Factor Family AT5G61190 43.046 1.78e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0409 - - gmx:100818186 707.597