Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0362 ATGATCATTCTCATCATGATGATGATTCCACCGTCGTCTTCTCCTTCTTCTTCGGTTCCCTCTCAGCCACCCCGTCTTCACTTTCACCATTGGGCCCCATCTCCGGCCCCTTCTCCGGCCACCCCTGCCCCGACACTCCTTCCTGTTCCTGTCAGCAAAACATCGCCTCTGCCCTCAAAGTTGCCGGTTGACTTCAGTCCGCCTCTGATTGCAATGGTTGTCGTCGTTGCCACCGCCTTTATCGTCGTCACCTACTCCCGCCTCATCTCCCGCCACCTCATGCCTCCGATAATCCGCCTAGCTCGCCGGTGGCGACGCCGTAGGCGACGCTCCTATCTCCCATCCTCCTCCGGCGACCTCGACTCGCTCCCTTATGATTCTCCTTTCGAGGCAATCGATGGACCTCACTTGTTCTCGCCTTATGGCCTCGACGAGTCCATCATCAAGACCATACCGTTTTCCCTCTACACTGCCAAATCCAATGATCAATTCGAAGAGTCTCGACGCGATTGCGCGGTCTGTTTGTTGGAGTTCGAAGATGATGAGTACGTCCGCACGCTGCCGTTTTGCTCACACACGTTTCACGTGGATTGCATCGACGTTTGGCTCAGGTCCCACGCAAATTGCCCCCTCTGCCGTGCCGGAGTTTTGTGCGCGGAGTCGCCGTTCACGCCAATGATGGCGGCGAGGATTCGGCCAAGCCTCGACGACGACACGATTTTGCATAGAATCAGTATGGACCCTCTGGCCGAAGCTCCCTCGCCCGTGGCTCATTCTCTGGTCTCGGAGATCACTCCTTGCAATGAAGAGCAATCCCCGAGAAGGAATACGGAGGACGATCGATTCAACGGCGGTCGTGATTTTCTCCTGAAGCGATCCTACTCGTTCGGATTCGAGCGGAGCTTGGCGTCGGAGAGAATGGTGATGGAGCCGGCGACGGCGTCACCGTGGCGGTACCACCGGAGGGGAAGCAGCAGCAGCTTCTGGACCAAAAGACCATCACCGTTCGGGTCGCTGGGAAAGCCGAGAGTGTTCTCGTTCAGATACTACAGAGGGATGAAGTCGCCGTTCTTCCGTAGACGAGGGTTCTTCCCCCTGTCAGAATCAAGCATGAGGTCATACAACGGAGGAGGGAGCTCGTCCCGGCGAAGCAAGTCAATAGCAAGCCCGATGTTCCTGAGGTCGTCGGCGGCGATGGCAGCGGTGGGAGCGGCAGCTTTCTCGTCTAGCCGGCTAAGGTGCGGCGACCCGGAAGCATTACTGTCACCGGAGAGATACAACAGGAGATAA 1290 0.5729 MIILIMMMIPPSSSPSSSVPSQPPRLHFHHWAPSPAPSPATPAPTLLPVPVSKTSPLPSKLPVDFSPPLIAMVVVVATAFIVVTYSRLISRHLMPPIIRLARRWRRRRRRSYLPSSSGDLDSLPYDSPFEAIDGPHLFSPYGLDESIIKTIPFSLYTAKSNDQFEESRRDCAVCLLEFEDDEYVRTLPFCSHTFHVDCIDVWLRSHANCPLCRAGVLCAESPFTPMMAARIRPSLDDDTILHRISMDPLAEAPSPVAHSLVSEITPCNEEQSPRRNTEDDRFNGGRDFLLKRSYSFGFERSLASERMVMEPATASPWRYHRRGSSSSFWTKRPSPFGSLGKPRVFSFRYYRGMKSPFFRRRGFFPLSESSMRSYNGGGSSSRRSKSIASPMFLRSSAAMAAVGAAAFSSSRLRCGDPEALLSPERYNRR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0362 429 SMART ring_2 171 212 IPR001841 -
Prci14g0362 429 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
Prci14g0362 429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 217 IPR013083 -
Prci14g0362 429 PANTHER RING-H2 FINGER PROTEIN ATL16 52 243 IPR044600 GO:0016567|GO:0016740
Prci14g0362 429 SUPERFAMILY RING/U-box 157 218 - -
Prci14g0362 429 Pfam Ring finger domain 170 213 IPR001841 -
Prci14g0362 429 CDD RING-H2_EL5-like 170 213 - -
Prci14g0362 429 FunFam RING-H2 finger protein ATL65 136 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0362 Prci-Chr14 2835246 2836998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0362 62 429 C3H Transcription Factor Family AT3G18930 53.000 2.04e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0362 - K19041 gmx:100806115 550.051