Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0343 ATGGACGAGGAAGCAAATCCCCGGTGGCGATCAAGCTTGCCGGACGGCAAACCGGCCCACTTTTTCAAGATAATACTTCCTACTGCGATTCTTGACAAAAAATTGAGAGTTCCTAAGGCGTTTGTGAATCAGCATGGGGATGATTTCTCTCCAATCATTACCTTACATGATCCTAATGCTCGAGAATGGAAAATTGGCTTGGAGAAGAGTGAAGATGATGATGTTTGGTTCTCAGAAGGCTGGGACAAGTTTCTGGAATACTATTCCATCACCAACGAACACTTTCTGGTTTTCAGATACGAAGGAGATTCAAGATTCCATGTTCTAATATTCGACATGACTGGATCAGAAATTCAATATCCTTCCCAAAATCTAAGTCCTGAGAGAAACCAGGTTGCCTCATCGGAATCATCAAAGAGCAACCACCATGATTATCATCGGAGTCAAAATGACAATGACAACCACAATGATATTGATAATGATAGTGATAGTAATAATGATAATGATATTGGTATTGACCATCACTTTACTGAAGAATATTTTCCTGATGACGAGGATGATTCTACTCATGCATATGAAGAAGATGATCCCTACTATAGCACTTCTTCATCTAAATCTACTTCTACTTCTCCATCTGAATCCACTTCTCCAACAAAAAGACGAGGCTTCACCAAATTCATCGATAAATCATCAAAAAGAGAGAGAAGAAAAGAGTATTCTTCTCCTTCTTCAAGATCTGCATTTCGAAGAAAAAGAAAGAGGCATCAACGCGGTGCCAGTGAACGTGGTGATGAACAAAGTGACGGAGGTTCAAATCATAAAAGAAGAAGATCCAAAGAAGGAAGGCATGGAGGGAGAGCGAAGAAAATAGACCACGTGGAATATGTTGGTAAACAAACAGTGAAGTCAAAATCATACGAAAAGAGGCACATATCAGATAGAGTGAGAACCAAGGTTATCCAAGCTGCTGACAACTACAGATCTCGCTTTCCTTATTTCAGGGCTGTCTTGAGACCTCACAACTTATACAACAGTTTTATGCTTCTCCAAACCTAG 1056 0.4006 MDEEANPRWRSSLPDGKPAHFFKIILPTAILDKKLRVPKAFVNQHGDDFSPIITLHDPNAREWKIGLEKSEDDDVWFSEGWDKFLEYYSITNEHFLVFRYEGDSRFHVLIFDMTGSEIQYPSQNLSPERNQVASSESSKSNHHDYHRSQNDNDNHNDIDNDSDSNNDNDIGIDHHFTEEYFPDDEDDSTHAYEEDDPYYSTSSSKSTSTSPSESTSPTKRRGFTKFIDKSSKRERRKEYSSPSSRSAFRRKRKRHQRGASERGDEQSDGGSNHKRRRSKEGRHGGRAKKIDHVEYVGKQTVKSKSYEKRHISDRVRTKVIQAADNYRSRFPYFRAVLRPHNLYNSFMLLQT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0343 351 PANTHER B3 DOMAIN-CONTAINING 14 261 - -
Prci14g0343 351 Gene3D - 12 115 IPR015300 -
Prci14g0343 351 SUPERFAMILY DNA-binding pseudobarrel domain 15 113 IPR015300 -
Prci14g0343 351 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Prci14g0343 351 MobiDBLite consensus disorder prediction 121 289 - -
Prci14g0343 351 MobiDBLite consensus disorder prediction 258 275 - -
Prci14g0343 351 MobiDBLite consensus disorder prediction 139 181 - -
Prci14g0343 351 Pfam B3 DNA binding domain 21 112 IPR003340 GO:0003677
Prci14g0343 351 CDD B3_DNA 20 112 IPR003340 GO:0003677
Prci14g0343 351 MobiDBLite consensus disorder prediction 121 138 - -
Prci14g0343 351 SMART B3_2 21 114 IPR003340 GO:0003677
Prci14g0343 351 MobiDBLite consensus disorder prediction 222 245 - -
Prci14g0343 351 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0343 Prci-Chr14 2623332 2625775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0343 18 348 B3 DNA Binding Superfamily AT3G18990 27.410 3.80e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci14g0343 B3 1.9e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0343 - - pcin:129292744 632.484