Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0342 ATGGACGAGGAAGCAAATCCCCGGTGGCGATCAAGCTTGCCGGACGGCAAACCGGCCCACTTTTTCAAGATAATACTTCCTACTGCGATTCTTGACAAAAAATTGAGAGTTCCTAAGGCGTTTGTGAATCAGCATGGGGATGATTTCTCTCCAATCATTACCTTACATGATCCTAATGCTCGAGAATGGAAAATTGGCTTGGAGAAGAGTGAAGATGATGATGTTTGGTTCTCAGAAGGCTGGGACAAGTTTCTGGAATACTATTCCATCACCAACGAACACTTTCTGGTTTTCAGATACGAAGGAGATTCAAGATTCCATGTTCTAATATTCGACATGACTGGATCAGAAATTCAATATCCTTCCCAAAATCTAAGTCCTGAGAGAAACCAGGTTGCCTCATCGGAATCATCAAAGAGCAACCACCATGATTATCATCGGAGTCAAAATGACAATGACAACCACAATGATATTGATAATGATAGTGATAGTAATAATGATAATGATATTGGTATTGACCATCACTTTACTGAAGAATATTTTCCTGATGACGAGGATGATTCTACTCATGCATATGAAGAAGATGATCCCTACTATAGCACTTCTTCATCTAAATCTACTTCTACTTCTCCATCTGAATCCACTTCTCCAACAAAAAGACGAGGCTTCACCAAATTCATCGATAAATCATCAAAAAGAGAGAGAAGAAAAGAGTATTCTTCTCCTTCTTCAAGATCTGCATTTCGAAGAAAAAGAAAGAGGCATCAACGCGGTGCCAGTGAACGTGGTGATGAACAAAGTGACGGAGGTTCAAATCATAAAAGAAGAAGATCCAAAGAAGGAAGGCATGGAGGGAGAGCGAAGAAAATAGACCACGTGGAATATGTTGGTAAACAAACAGTGAAGTCAAAATCATACGAAAAGAGGCACATATCAGATAGAGTGAGAACCAAGGTTATCCAAGCTGCTGACAACTACAGATCTCGCTTTCCTTATTTCAGGGCTGTCTTGAGACCTCACAACTTATACAACAGTTTTATGTATGTGCCAGCACGTTTTGCAGTGAAGTATTTGGGAGGAGGGTCATCAGACAAGAAGATAAGACTGGAGAACGGGAGGGGGAAGCAGTGGGAAGCTCGATGCTTTCCCAGGAATGGGGCTGGAAATGGGATGAACATAGGAGAAGGCTGGGCCAAGTTTAAGGAGGACAATCAGATCAAGGAAGGGGACGTCTGTGTCTTTGAGTTGCTCCACAGTATTAACTTTGTGTTGAGAGTTCAAATATTTCGCGTCAGACATTATGCAGATCGCTGA 1314 0.4163 MDEEANPRWRSSLPDGKPAHFFKIILPTAILDKKLRVPKAFVNQHGDDFSPIITLHDPNAREWKIGLEKSEDDDVWFSEGWDKFLEYYSITNEHFLVFRYEGDSRFHVLIFDMTGSEIQYPSQNLSPERNQVASSESSKSNHHDYHRSQNDNDNHNDIDNDSDSNNDNDIGIDHHFTEEYFPDDEDDSTHAYEEDDPYYSTSSSKSTSTSPSESTSPTKRRGFTKFIDKSSKRERRKEYSSPSSRSAFRRKRKRHQRGASERGDEQSDGGSNHKRRRSKEGRHGGRAKKIDHVEYVGKQTVKSKSYEKRHISDRVRTKVIQAADNYRSRFPYFRAVLRPHNLYNSFMYVPARFAVKYLGGGSSDKKIRLENGRGKQWEARCFPRNGAGNGMNIGEGWAKFKEDNQIKEGDVCVFELLHSINFVLRVQIFRVRHYADR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0342 437 SUPERFAMILY DNA-binding pseudobarrel domain 328 430 IPR015300 -
Prci14g0342 437 ProSiteProfiles B3 DNA-binding domain profile. 332 432 IPR003340 GO:0003677
Prci14g0342 437 SMART B3_2 21 114 IPR003340 GO:0003677
Prci14g0342 437 SMART B3_2 332 432 IPR003340 GO:0003677
Prci14g0342 437 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Prci14g0342 437 CDD B3_DNA 331 430 IPR003340 GO:0003677
Prci14g0342 437 MobiDBLite consensus disorder prediction 121 290 - -
Prci14g0342 437 PANTHER B3 DOMAIN-CONTAINING 14 420 - -
Prci14g0342 437 MobiDBLite consensus disorder prediction 258 275 - -
Prci14g0342 437 MobiDBLite consensus disorder prediction 139 181 - -
Prci14g0342 437 Pfam B3 DNA binding domain 21 112 IPR003340 GO:0003677
Prci14g0342 437 Pfam B3 DNA binding domain 335 431 IPR003340 GO:0003677
Prci14g0342 437 CDD B3_DNA 20 112 IPR003340 GO:0003677
Prci14g0342 437 MobiDBLite consensus disorder prediction 121 138 - -
Prci14g0342 437 SUPERFAMILY DNA-binding pseudobarrel domain 15 113 IPR015300 -
Prci14g0342 437 Gene3D - 12 115 IPR015300 -
Prci14g0342 437 Gene3D - 311 435 IPR015300 -
Prci14g0342 437 MobiDBLite consensus disorder prediction 222 245 - -
Prci14g0342 437 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0342 Prci-Chr14 2623036 2625775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0342 18 431 B3 DNA Binding Superfamily AT3G18990 31.250 1.27e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci14g0342 B3 7.5e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0342 - - pcin:129292744 820.076