Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0341 ATGCCGCGTCCTTGTTTTCACAAGCTTGTCCTTCCATCCACCGTCCAAGCCGGCCAATTGAGGGTTCCAGATTATTTTTTGAGGAGGTTTGGTGGGGAGCTGTCTACAAGTGCTACCCTCAGTGTTCCTGATGGCAGTGTCTGGCGTATTGGTTTTAAAAAAGCAGACAACAAATTTTGGCTCCATGATGGTTGGAAGGAGTTTGTTCAACGTTATTCCATAGGTGTTGGATGCTTTTTGGTGTTCAGATATGAAGGGAATTCTTCTTTCAACGTTCATATTTTCAATTTGGCTGCTTCCGAGATAAACTATCAATTAGCCAATCGAAACTGTGATGAACGGCCTTACTTTACCAACCAACGTATTTTTGATGACATGGAAGATGAAGATTACAATGAATACTCTGACTCAACACCTTTGCATTTAAACCCTGGTGCATTTAATAACAAGGTCATTACTGGATCTGCGGATCAATTGACACCTGGCAAGAATTATACTCCTTCACCATTGCAGAATTTGTTTAATGGGTCTAAACTTAATAGCATAAACTGGGGAGACACCATTTCTTCAAAGGGTGCCAATTCACAAAACAATCAATTGATGAGAGATAAAGGTGTTCAGTTCAATGCAGCTGAGTTTAAGAGGTCTACTGAAGAGTTGAAATTACGTGCTTCCAATAATGAAATGCAGAGAGTTAAAAAAACTGTAAGAAAAAGGCGGAAAACTGATCCTAATGGTGAGGAATCCGCTCCTCATAATGAAGAGGAGGTAGAAATGCGTTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACCGTGACAGCAGAAGAAAGAGAAAGGGCAGTTAATGCTGCAAAAGCATATGAACCGCCTAATCCTTTCTGTAGGGTTGTCCTGCGGCCCTCCTATCTGTATAGGGGATGCATAATGTATTTGCCCTCATGCTTTGCAGAAAAGCATTTGAATGGGGTTTCAGGTTTCATCAAACTCCAGATTCCCGAGGGGAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGAGGTAGAGCGAAGTTAAGCCAGGGGTGGTTCGAATTCGCCCAGGATAACAACCTCGGAGAAGGCGATGTCTGCGTTTTTGAGCTTCTTAGAATGAGGGAAGTAGTGCTGAAAGTTACTATATTCCAAGTCCTCGAAGAAGACGTGGGATTGTTGAACCCTCCCATGCAGCAAAACCCCAGCATGAGCCCAACCCCAAAACTGTTGAACAATCCCATGCAGCAAAATGTGAGCCCTATTAAAATGATTAGAAATTAG 1296 0.4244 MPRPCFHKLVLPSTVQAGQLRVPDYFLRRFGGELSTSATLSVPDGSVWRIGFKKADNKFWLHDGWKEFVQRYSIGVGCFLVFRYEGNSSFNVHIFNLAASEINYQLANRNCDERPYFTNQRIFDDMEDEDYNEYSDSTPLHLNPGAFNNKVITGSADQLTPGKNYTPSPLQNLFNGSKLNSINWGDTISSKGANSQNNQLMRDKGVQFNAAEFKRSTEELKLRASNNEMQRVKKTVRKRRKTDPNGEESAPHNEEEVEMRFRFYESASARKRTVTAEERERAVNAAKAYEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQIPEGRQWPVRCLYRGGRAKLSQGWFEFAQDNNLGEGDVCVFELLRMREVVLKVTIFQVLEEDVGLLNPPMQQNPSMSPTPKLLNNPMQQNVSPIKMIRN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0341 431 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Prci14g0341 431 MobiDBLite consensus disorder prediction 230 254 - -
Prci14g0341 431 Gene3D - 273 392 IPR015300 -
Prci14g0341 431 SMART B3_2 6 98 IPR003340 GO:0003677
Prci14g0341 431 SMART B3_2 296 391 IPR003340 GO:0003677
Prci14g0341 431 Gene3D - 1 98 IPR015300 -
Prci14g0341 431 Pfam B3 DNA binding domain 8 96 IPR003340 GO:0003677
Prci14g0341 431 Pfam B3 DNA binding domain 299 388 IPR003340 GO:0003677
Prci14g0341 431 CDD B3_DNA 4 96 IPR003340 GO:0003677
Prci14g0341 431 MobiDBLite consensus disorder prediction 240 254 - -
Prci14g0341 431 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Prci14g0341 431 SUPERFAMILY DNA-binding pseudobarrel domain 289 389 IPR015300 -
Prci14g0341 431 ProSiteProfiles B3 DNA-binding domain profile. 296 391 IPR003340 GO:0003677
Prci14g0341 431 PANTHER B3 DOMAIN-CONTAINING 3 379 - -
Prci14g0341 431 CDD B3_DNA 294 388 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0341 Prci-Chr14 2617470 2621480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0341 1 396 B3 DNA Binding Superfamily AT3G18990 50.000 1.79e-129 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci14g0341 B3 1.6e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0341 - - gmx:100813285 613.994