Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0338 ATGGCTAAACCATATTCGAAACAAGCTTTAGGCTGCTTTATCTTTAGCTCCTTCATTTTATCTTCTCTCTCTCATTTACTTCCATCAATAACAGGGGATAGCAATTTTTCATTAGATTTTAATATTCAACTGGATGCTAATTTGACTTTTGACCATGGAAGGCTTAAAAATGCTTATGTTGCTCTTCAAGCATGGAAAAGTGCCATATACTCCGATCCATTGAACACACTTGACAATTGGGTGGGTTCTGATGTATGTTCTTATAATGGCGTGTTCTGTGCTCAAGCTCTTGATGACCCTAAATTAACTGTTGTTGCTGGAATTGATCTCAACCATGCAGACATTGCTGGGAGTCTTGTACCAGAGTTAGGCCTTTTAACAGACATGGCTCTTTTCCATATAAACTCTAACAGGTTTTGTGGGGTTGTTCCAGATAGCTTTAAGAATCTCACCCTCATGTACGAGTTTGATATCAGTAACAATAGATTTGTTGGTGTTTTTCCTCTCGTAGTCCTTACATGGCCAAATATAAAGTACTTGGATCTCAGGTATAATGATTTTGAAGGACCTTTGCCTCCACAGCTATTTGAGAAAGATATTGATGCATTGTTCTTGAACAATAATCGTTTTGTTTCAACCATCCCAGAAAACCTAGGAAACTCCACAATCTCTGTGGTAACATTTGCTAACAACAATTTCACAGGTTGCATACCAAAATCAATTGGGAACATGAGGAACTTGAATGAAATCATTTTCTTAGGCAATAGCCTTAGAGGTTGCTTCCCAACAGAGATTGGATTATTAGGAAATGTGACAGTTTTTGATGCAAGTCATAATGGGTTTATTGGGACTTTGCCAAACCTATCAGGTGTGAAGAGCATGGAGGTAATAGACATTTCACATAATAAGATATCTGGGTATGTGTCGGACACCATTTGCAAGCTACCGAGGTTGACCAAATTCACATTCTCTGACAATTACTTTAACGGAGAAGCTCAATCTTGTGCACCTTCTGCAAGAGAAAATGTTGTTTTTGATGATAACAATAATTGTTTGCCATTAAGGTCAAATCAAAAGACAAGCAAGCAATGTCTCCCGGTGGTGACTCGCCCCGTAGATTGCAGTAAGAGTTGTAGGAGTGGTGACAACAACCATACCCCATTAACACCAAAATCACCAAAGGTAAAGCCACTGGTTCACTCTCCTCCACCGCCACTCATGTTCTCTCCTCCTTTGCCAGTTCGCTCTCCTCCACCGCCAGTCCAATCTCCACCACCACCAGTGTTCTCTCCTCTGCCTCCCATCCATTCTCCGCCACCACCGCCAGTTCACTCTCCACCACCACCAGTGTTCTCTCCTCCTCCGCCACCAGTTCACGCTCCTCCACCACCCGTGTTCTCTCCTCCACCTCCCGTCCAATCTCCGCCACCGCCGCCAATTCACTCTCCACCACCACCAGTGTTCTCTCCTCCTCTGCCACGAGTTCACCCTCCTCCACCACCCGTGTTCTCTCCTCCACCTCCTATCCAATCTTCGCCGCCGCTACCAGTTCAGTCTCCACCACCACCAGTGTTCTCTCCTCCTCCTCCAGTCCACTCTCCACCACCACCAATTCACTCTCCTCCTCCTCCAATCCAATCTTCGCCACCGCCGTCGCCAGTTCACTCTCGTCCACCACCAACTAGTTCTCCTCCTCTAACTTCTATATTTTCTCCACCTCCACCGGCATGGAATGATGTCATCATACCCCCAACCTTTGGGGCCCAATATAGCTCCCCACCTCCACCGGCTATTGTTGGATATTAA 1806 0.4507 MAKPYSKQALGCFIFSSFILSSLSHLLPSITGDSNFSLDFNIQLDANLTFDHGRLKNAYVALQAWKSAIYSDPLNTLDNWVGSDVCSYNGVFCAQALDDPKLTVVAGIDLNHADIAGSLVPELGLLTDMALFHINSNRFCGVVPDSFKNLTLMYEFDISNNRFVGVFPLVVLTWPNIKYLDLRYNDFEGPLPPQLFEKDIDALFLNNNRFVSTIPENLGNSTISVVTFANNNFTGCIPKSIGNMRNLNEIIFLGNSLRGCFPTEIGLLGNVTVFDASHNGFIGTLPNLSGVKSMEVIDISHNKISGYVSDTICKLPRLTKFTFSDNYFNGEAQSCAPSARENVVFDDNNNCLPLRSNQKTSKQCLPVVTRPVDCSKSCRSGDNNHTPLTPKSPKVKPLVHSPPPPLMFSPPLPVRSPPPPVQSPPPPVFSPLPPIHSPPPPPVHSPPPPVFSPPPPPVHAPPPPVFSPPPPVQSPPPPPIHSPPPPVFSPPLPRVHPPPPPVFSPPPPIQSSPPLPVQSPPPPVFSPPPPVHSPPPPIHSPPPPIQSSPPPSPVHSRPPPTSSPPLTSIFSPPPPAWNDVIIPPTFGAQYSSPPPPAIVGY 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0338 601 PRINTS Proline rich extensin signature 427 443 - -
Prci14g0338 601 PRINTS Proline rich extensin signature 406 427 - -
Prci14g0338 601 PRINTS Proline rich extensin signature 445 462 - -
Prci14g0338 601 PRINTS Proline rich extensin signature 393 405 - -
Prci14g0338 601 MobiDBLite consensus disorder prediction 453 580 - -
Prci14g0338 601 MobiDBLite consensus disorder prediction 374 433 - -
Prci14g0338 601 MobiDBLite consensus disorder prediction 453 601 - -
Prci14g0338 601 Gene3D Ribonuclease Inhibitor 57 357 IPR032675 -
Prci14g0338 601 Pfam Leucine rich repeat N-terminal domain 59 93 IPR013210 -
Prci14g0338 601 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 499 - -
Prci14g0338 601 MobiDBLite consensus disorder prediction 376 390 - -
Prci14g0338 601 MobiDBLite consensus disorder prediction 396 433 - -
Prci14g0338 601 FunFam Leucine-rich repeat extensin-like protein 1 59 220 - -
Prci14g0338 601 SUPERFAMILY L domain-like 59 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0338 Prci-Chr14 2594659 2596546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0338 10 376 Trihelix Transcription Factor Family AT3G19020 63.061 4.82e-175 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0338 - - qsa:O6P43_011664 538.88