Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0335 ATGGGTTCGGTTCCTCCAGAACTGAGCTTGGATTTGAGACCCACTTTTGTTCCCAAGACGATCAGTGATTTCCTCTATGAGGTTTCCTCGATCGGCAACGCTGCTGACAAGTTGTCGAGGTTCGATGAGTTTCTCAAGAGATTGGAGGAGGAAATGAAGAAGATCGACGCTTTTAAGCGAGAGCTTCCTCTCTGCATGCTCCTCCTAAACGATGCAATCTTGACTCTGAAGGAGGAATCAGCAAAACTCAGGATGCCTACTTCTCGGCCAGTGCTGGAGGAATTTATTCCCTTGACAAGAGAATGTGATCAGAAAAAGGATAATAAGAAAGAAAACGGATGCAGAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTTTGGAATACCAGTATTCATCCCGCTACTAACCATGCTTATGAGCAAAGGCAACACTATGAATTAGAAAACAAGAAATGCGAAGAGGAAGGGCAATCTGTTCCTGAGGTCCCATTCCAATCTGGTAGAAACGGCGATAATGGATGCAGAGCGTTCTTTCCCTTTTCAGCCTACCCTAGCAACCCTGCGACGCCAGTGGCAACTAGGGAAGAGAAGGAAGACTCCATTAATGGGCTTTCTCTTCTGACTCCTGGTACCAAAAATTTGAAGGAAGGTTCTGGTTCAAGTGGATCAGGAAGTAGCTCTAGCAGAGCAGTTTCCTCCTCTACTCCCAGTTCACAGCCAATTATACCCACAGGTCATCTGCAGCCACAGAAGCAAGTTGCCCGGAAACAGAGGAGGTGCTGGTCGCCTGAATTGCACCGACGATTTGTCAATGCATTACAGCAACTTGGAGGTTCTCTAGCGGCAACCCCTAAACAAATAAGAGAACTCATGCAGGTTGATAGCCTGACCAATGATGAAGTGAAGAGTCATTTACAAAAATATCGACTTCACACTCGAAGAACACCAGCTACCACGGCTGCGCCTGCTAATCAATCTGTAGTTCTTGGAGGTTTGTGGATGTCCCAAGATCAACACAATGAATCCTCCAAGGCTAGCAGTTCAGGGTCTGGTTCTCCTCAAGGTCCCCTCCAGTTAGCAGGATCTGGTGGAGGGATGTCTCGAACTGAAGGCGACAGCATGGAAGATGATGAAGAGGAAAAATCTGAGAGCTTTAGCTGGAAAAGTCATATTCACAAACCTCGAAAAGATGTATAG 1197 0.4637 MGSVPPELSLDLRPTFVPKTISDFLYEVSSIGNAADKLSRFDEFLKRLEEEMKKIDAFKRELPLCMLLLNDAILTLKEESAKLRMPTSRPVLEEFIPLTRECDQKKDNKKENGCRDKKNWMSSVQLWNTSIHPATNHAYEQRQHYELENKKCEEEGQSVPEVPFQSGRNGDNGCRAFFPFSAYPSNPATPVATREEKEDSINGLSLLTPGTKNLKEGSGSSGSGSSSSRAVSSSTPSSQPIIPTGHLQPQKQVARKQRRCWSPELHRRFVNALQQLGGSLAATPKQIRELMQVDSLTNDEVKSHLQKYRLHTRRTPATTAAPANQSVVLGGLWMSQDQHNESSKASSSGSGSPQGPLQLAGSGGGMSRTEGDSMEDDEEEKSESFSWKSHIHKPRKDV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0335 398 MobiDBLite consensus disorder prediction 337 357 - -
Prci14g0335 398 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Prci14g0335 398 Coils Coil 41 61 - -
Prci14g0335 398 MobiDBLite consensus disorder prediction 204 246 - -
Prci14g0335 398 Gene3D - 255 313 - -
Prci14g0335 398 MobiDBLite consensus disorder prediction 381 398 - -
Prci14g0335 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 255 313 IPR017930 -
Prci14g0335 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 388 IPR044787 GO:0003700|GO:0006355
Prci14g0335 398 MobiDBLite consensus disorder prediction 337 398 - -
Prci14g0335 398 SUPERFAMILY Homeodomain-like 254 314 IPR009057 -
Prci14g0335 398 MobiDBLite consensus disorder prediction 187 252 - -
Prci14g0335 398 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 311 IPR006447 GO:0003677
Prci14g0335 398 FunFam Myb family transcription factor 255 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0335 Prci-Chr14 2547364 2550270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0335 7 334 G2-like Transcription Factor Family AT2G03500 40.525 1.79e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci14g0335 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0335 - - qsa:O6P43_011684 458.373