Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0334 ATGGGTTCGGTTCCTCCAGAACTGAGCTTGGATTTGAGACCCACTTTTGTTCCCAAGACGATCAGTGATTTCCTCTATGAGGTTTCCTCGATCGGCAACGCTGCTGACAAGTTGTCGAGGTTCGATGAGTTTCTCAAGAGATTGGAGGAGGAAATGAAGAAGATCGACGCTTTTAAGCGAGAGCTTCCTCTCTGCATGCTCCTCCTAAACGATGCAATCTTGACTCTGAAGGAGGAATCAGCAAAACTCAGGATGCCTACTTCTCGGCCAGTGCTGGAGGAATTTATTCCCTTGACAAGAGAATGTGATCAGAAAAAGGATAATAAGAAAGAAAACGGATGCAGAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTTTGGAATACCAGTATTCATCCCGCTACTAACCATGCTTATGAGCAAAGGCAACACTATGAATTAGAAAACAAGCAGAAATGCGAAGAGGAAGGGCAATCTGTTCCTGAGGTCCCATTCCAATCTGGTAGAAACGGCGATAATGGATGCAGAGCGTTCTTTCCCTTTTCAGCCTACCCTAGCAACCCTGCGACGCCAGTGGCAACTAGGGAAGAGAAGGAAGACTCCATTAATGGGCTTTCTCTTCTGACTCCTGGTACCAAAAATTTGAAGGAAGGTTCTGGTTCAAGTGGATCAGGAAGTAGCTCTAGCAGAGCAGTTTCCTCCTCTACTCCCAGTTCACAGCCAATTATACCCACAGGTCATCTGCAGCCACAGAAGCAAGTTGCCCGGAAACAGAGGAGGTGCTGGTCGCCTGAATTGCACCGACGATTTGTCAATGCATTACAGCAACTTGGAGGTTCTCTAGCGGCAACCCCTAAACAAATAAGAGAACTCATGCAGGTTGATAGCCTGACCAATGATGAAGTGAAGAGTCATTTACAAAAATATCGACTTCACACTCGAAGAACACCAGCTACCACGGCTGCGCCTGCTAATCAATCTGTAGTTCTTGGAGGTTTGTGGATGTCCCAAGATCAACACAATGAATCCTCCAAGGCTAGCAGTTCAGGGTCTGGTTCTCCTCAAGGTCCCCTCCAGTTAGCAGGATCTGGTGGAGGGATGTCTCGAACTGAAGGCGACAGCATGGAAGATGATGAAGAGGAAAAATCTGAGAGCTTTAGCTGGAAAAGTCATATTCACAAACCTCGAAAAGATGTATAG 1200 0.4642 MGSVPPELSLDLRPTFVPKTISDFLYEVSSIGNAADKLSRFDEFLKRLEEEMKKIDAFKRELPLCMLLLNDAILTLKEESAKLRMPTSRPVLEEFIPLTRECDQKKDNKKENGCRDKKNWMSSVQLWNTSIHPATNHAYEQRQHYELENKQKCEEEGQSVPEVPFQSGRNGDNGCRAFFPFSAYPSNPATPVATREEKEDSINGLSLLTPGTKNLKEGSGSSGSGSSSSRAVSSSTPSSQPIIPTGHLQPQKQVARKQRRCWSPELHRRFVNALQQLGGSLAATPKQIRELMQVDSLTNDEVKSHLQKYRLHTRRTPATTAAPANQSVVLGGLWMSQDQHNESSKASSSGSGSPQGPLQLAGSGGGMSRTEGDSMEDDEEEKSESFSWKSHIHKPRKDV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0334 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 389 IPR044787 GO:0003700|GO:0006355
Prci14g0334 399 SUPERFAMILY Homeodomain-like 255 315 IPR009057 -
Prci14g0334 399 Coils Coil 41 61 - -
Prci14g0334 399 MobiDBLite consensus disorder prediction 188 253 - -
Prci14g0334 399 MobiDBLite consensus disorder prediction 338 358 - -
Prci14g0334 399 MobiDBLite consensus disorder prediction 151 171 - -
Prci14g0334 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 314 IPR017930 -
Prci14g0334 399 Gene3D - 256 314 - -
Prci14g0334 399 MobiDBLite consensus disorder prediction 382 399 - -
Prci14g0334 399 NCBIfam myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677
Prci14g0334 399 MobiDBLite consensus disorder prediction 338 399 - -
Prci14g0334 399 Pfam Myb-like DNA-binding domain 259 310 IPR001005 -
Prci14g0334 399 MobiDBLite consensus disorder prediction 205 247 - -
Prci14g0334 399 FunFam Myb family transcription factor 256 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0334 Prci-Chr14 2547364 2550271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0334 7 335 G2-like Transcription Factor Family AT2G03500 40.407 3.11e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci14g0334 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0334 - - qsa:O6P43_011684 454.907