Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0324 ATGGCTCAGCCAACTCCCGACGCCGCCGATCTGAATCCGCAGCAGCAGCAGCCGCAGCCGCAGCAATGGGCGCAGCCGCATCAGTATCACCAACAATGGATGACCATGCAATATCCGGCTTCGGCTATGGCGATGATGCAGCAACAGATGATGATGTATCCGCCGCATTATGTCCCTTACGTTCACCAATATTATCAGCCGCCATACCACCACCCGCACTTGAAACAGCCGCCGTCACAGCCGCAGCACCACCAGCAGAGCTCCAACGATGAGATCAGGACGATCTGGCTCGGTGACTTGCATCACTGGATGGACGAGAACTACCTAAATAGCTGCTTTGCTCACACAGGCGAGGTATATTCAGTGAAGGTTATACGAAATAAGCAAACTGGTCAGTCTGAAGGATATGGATTTGTTGAGTTTTGTACACGTGCAACAGCTGAGAAAGTTTTACAGAGCTACAATGGCACTATGATGCCAAATACAGACCAGCCATTTCGCCTTAATTGGGCTGCTTTCAGTTCAGGCGATAGGCGATCTGATGCTAATTCAGATTACTCTATATTTGTTGGGGACTTGGCTGTAGATGTTACCGATGCTATGCTACAGGAAACCTTTGCAAGCAGATATTCATCTGTTAAGGGAGCAAAAGTTGTCATTGATTCTAGCACTGGCCGTTCAAAAGGTTATGGCTTTGTTAGGTTTGCTGATGAAAATGAAAGATCCAGGGCGCTGGCTGAAATGAATGGTCAATATTGTTCAAGTAGGCCAATGCGAATAAGTATTGCAACTCCAAAGAAATCATACGGACACCAACAACATTACTCTTCACAAGCTGTGGTGTTGGCTAATGGATATTCTTCTAATGGTGCTATGGCCCAAGGTTCCCAGTCTGAAGGGGACTCTTTTAACACAACTATATTTGTTGGAGGGCTTGATTCAGACGTCAGTGATGAAGATCTCAGACAACCGTTTTTGCAATATGGTGAAGTTGTCTCCGTGAAGATACCCGTTGGAAAGGGGTGTGGTTTTGTTCAATTTGCTAACAGAAAGAATGCAGAGGAGGCAATTCAGGCATTGAATGGGACAGTAATAGGAAAGCAGACAGTGCGTCTTTCTTGGGGTCGCAGTCCAGGAAATAAGCATTGGAGGACGGATTCCAATGGAGGTCACCATGGAGGGCAAGGTTATGGTGTAAGACAGAATCAGGCCTGA 1215 0.47 MAQPTPDAADLNPQQQQPQPQQWAQPHQYHQQWMTMQYPASAMAMMQQQMMMYPPHYVPYVHQYYQPPYHHPHLKQPPSQPQHHQQSSNDEIRTIWLGDLHHWMDENYLNSCFAHTGEVYSVKVIRNKQTGQSEGYGFVEFCTRATAEKVLQSYNGTMMPNTDQPFRLNWAAFSSGDRRSDANSDYSIFVGDLAVDVTDAMLQETFASRYSSVKGAKVVIDSSTGRSKGYGFVRFADENERSRALAEMNGQYCSSRPMRISIATPKKSYGHQQHYSSQAVVLANGYSSNGAMAQGSQSEGDSFNTTIFVGGLDSDVSDEDLRQPFLQYGEVVSVKIPVGKGCGFVQFANRKNAEEAIQALNGTVIGKQTVRLSWGRSPGNKHWRTDSNGGHHGGQGYGVRQNQA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0324 404 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 305 377 IPR000504 GO:0003723
Prci14g0324 404 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 186 265 IPR000504 GO:0003723
Prci14g0324 404 SMART rrm1_1 306 373 IPR000504 GO:0003723
Prci14g0324 404 SMART rrm1_1 187 261 IPR000504 GO:0003723
Prci14g0324 404 SMART rrm1_1 94 169 IPR000504 GO:0003723
Prci14g0324 404 SUPERFAMILY RNA-binding domain, RBD 299 398 IPR035979 GO:0003676
Prci14g0324 404 FunFam Polyadenylate-binding protein RBP47B 92 172 - -
Prci14g0324 404 MobiDBLite consensus disorder prediction 8 26 - -
Prci14g0324 404 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 173 IPR000504 GO:0003723
Prci14g0324 404 FunFam Polyadenylate-binding protein RBP47B 174 276 - -
Prci14g0324 404 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 188 258 IPR000504 GO:0003723
Prci14g0324 404 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 307 370 IPR000504 GO:0003723
Prci14g0324 404 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 162 IPR000504 GO:0003723
Prci14g0324 404 FunFam Polyadenylate-binding protein RBP47 287 402 - -
Prci14g0324 404 MobiDBLite consensus disorder prediction 1 26 - -
Prci14g0324 404 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 84 381 - -
Prci14g0324 404 MobiDBLite consensus disorder prediction 69 89 - -
Prci14g0324 404 SUPERFAMILY RNA-binding domain, RBD 64 175 IPR035979 GO:0003676
Prci14g0324 404 CDD RRM2_SECp43_like 185 264 - -
Prci14g0324 404 CDD RRM1_SECp43_like 94 174 - -
Prci14g0324 404 Gene3D - 92 172 IPR012677 -
Prci14g0324 404 CDD RRM3_NGR1_NAM8_like 304 375 - -
Prci14g0324 404 Gene3D - 173 279 IPR012677 -
Prci14g0324 404 SUPERFAMILY RNA-binding domain, RBD 170 281 IPR035979 GO:0003676
Prci14g0324 404 Gene3D - 286 404 IPR012677 -
Prci14g0324 404 MobiDBLite consensus disorder prediction 375 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0324 Prci-Chr14 2462876 2467511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0324 92 374 Eukaryotic Initiation Factors Gene Family AT2G23350 28.028 9.41e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0324 - - gmx:100798089 556.599