Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0309 ATGGTGGTTTCTAAGTTGACATACGAGGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAGGAGCTCAACCTCAACAAGCTCGCTAGTGCTTTGAAACCTTTACCCTCACCTAAGCCTTCCCCTGCGAAGCCCAGGGTGCCACGTCAGCCGCTCAGCCCTTCTTCGGCTCCGGCAAGAAGGTCTAGTCGCGTAGCCAACTTGCCTCCTCCAAACTACAAGGAAGTCCCCATTGAACCTTTGCTGAGACCAAGAAGGTCCTATCAGAAAAGGGACTTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGGGCAGAAGAACTTCTCTCTGGTTTAGATTCCAAATACCCAAGTTTCATCAAGCCTATGCTCCAATCCCATGTCACTGGAGGATTTTGGCTAGGTCTTCCAGTTCATTTCTGCAAAACTCATCTTCCTCACGATGATGAAACAGTAACTCTAATAGATGAGGATGGAAACGAGTCACCCACCAAATACCTTGCTGATAAAACAGGTCTTAGTGGTGGTTGGCGAGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTGGTGTTTCAACTGATCAAACCCACAAAATTTAAGGTGTTCATAATTAGAGCATATAAATCAGAAAACAAGGATGAAGAAGATGAAGATTTGGATGGTACACACTTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTACAAGGTAG 747 0.4471 MVVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPLPSPKPSPAKPRVPRQPLSPSSAPARRSSRVANLPPPNYKEVPIEPLLRPRRSYQKRDLLNRVYASDEVRQYAIDRAEELLSGLDSKYPSFIKPMLQSHVTGGFWLGLPVHFCKTHLPHDDETVTLIDEDGNESPTKYLADKTGLSGGWRGFSIDHELVDGDALVFQLIKPTKFKVFIIRAYKSENKDEEDEDLDGTHLNRSSKRVRASTR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0309 248 Coils Coil 6 33 - -
Prci14g0309 248 SMART B3_2 128 220 IPR003340 GO:0003677
Prci14g0309 248 MobiDBLite consensus disorder prediction 224 239 - -
Prci14g0309 248 MobiDBLite consensus disorder prediction 38 55 - -
Prci14g0309 248 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 50 224 IPR044837 -
Prci14g0309 248 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Prci14g0309 248 MobiDBLite consensus disorder prediction 224 248 - -
Prci14g0309 248 MobiDBLite consensus disorder prediction 32 80 - -
Prci14g0309 248 SUPERFAMILY DNA-binding pseudobarrel domain 121 217 IPR015300 -
Prci14g0309 248 Gene3D - 104 220 IPR015300 -
Prci14g0309 248 Pfam B3 DNA binding domain 128 215 IPR003340 GO:0003677
Prci14g0309 248 CDD B3_DNA 126 217 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0309 Prci-Chr14 2331736 2334386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0309 1 240 B3 DNA Binding Superfamily AT3G19184 60.800 8.73e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci14g0309 B3 4e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0309 - - pcin:129293089 455.292