Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0271 ATGTCAACATTTAGCAACTTTGCTCTGCATGAACTCACCCGCACCACCCCATTGCTGGGTTTACAACTCTACATCGTTGTTTTCGTTTTCCTCTTCATCTTCGTCGTTCTGGTGCTTCTGATCTTCCTCTGCATTCGCCGGAATCGAAGGTCCACCAATCCTAGTACTCGAGCCAGCCAGAGCTCCGGCGTAATTCCGTTGGTCTCCAAGGAGATCGTGGAGATCGAAGCCTTGGATCTTCTTGGTATTGAAGAGAAAAAGCTTAAGGTTGAAGGTCATGATCTGAGGAAGGAGGCGGAAGCCGAGGAGATCAATGTTGGATTTAGTAGAGGAAAAAAGGGCAGCGATGAGAGCGATAACGTGGACGGTCTGAAGATGGGGTGGGGCCGTTGGTACAGCTTGGCGGAGCTTAAGCTTGCGACACGTGGATTCGCCGACGAGAATGTGATCGGAGAAGGAGGTTATGGAATTGTGTACAGAGGAATTCTTCAGGATGGCTCTGTAGTTGCTGTGAAGAAGCTTCTAAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAGGCTATTGGAAGAGTAAAGCATAAAAATTTGGTGGGTTTAATAGGATATTGTGCCGAAGGTGCTCAAAGGATTCTCGTTTATGAATACGTTGAGAATGGAAACTTGGAGCAGTGGTTGCACGGTGAGGTAGGGCCTGCTAGCCCCTTAACATGGGATATACGTATGAGGATCGCCATAGGAACAGCAAAAGGGCTAGCCTATTTGCATGAAGGGTTAGAACCTAAAGTTGTGCACCGAGATGTGAAATCCAGTAACATTCTTCTGGACAAAAGATGGAATGCCAAGGTATCAGACTTTGGACTGGCCAAACTCCTAGGATCTGAGAAAAGCTATGTGTCTACACGCGTGATGGGGACATTCGGATATGTTTCACCTGAGTATGCTAGCACAGGTATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTGCTGATGGAAATAATCACCGGAAGAAGTCCCATTGATTATTCTAGATCGCCGGCAGAGATGAACTTGGTCGACTGGTTCAAGGGAATGGTGGCAAGCCGTCGTGGTGATGAGCTAGTAGATCCTTCAATCGAGATTAAACCCTCTCCGAGATCACTAAAGCGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGACGTCTGTAAGCGGCCAAAGATGAGTCAAATTGTTCATATGCTAGAGGCAGATGATTTCCCCTTTCGTTCCGAACTTCGGACAGCTAGAGGGAAAGATCCTGTGGCTTCTCCTACAGCTATTTGCAGCAAACTTTCATATCCACCAAAGCATGTGGAGTCAGTTGAGAGAACAAGATGGCGATGA 1386 0.469 MSTFSNFALHELTRTTPLLGLQLYIVVFVFLFIFVVLVLLIFLCIRRNRRSTNPSTRASQSSGVIPLVSKEIVEIEALDLLGIEEKKLKVEGHDLRKEAEAEEINVGFSRGKKGSDESDNVDGLKMGWGRWYSLAELKLATRGFADENVIGEGGYGIVYRGILQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGRVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVGPASPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRTARGKDPVASPTAICSKLSYPPKHVESVERTRWR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0271 461 PANTHER OS01G0323000 PROTEIN 8 428 - -
Prci14g0271 461 Pfam Protein kinase domain 145 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0271 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Prci14g0271 461 SMART serkin_6 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0271 461 Gene3D Phosphorylase Kinase; domain 1 113 219 - -
Prci14g0271 461 ProSiteProfiles Protein kinase domain profile. 144 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0271 461 FunFam Probable serine/threonine-protein kinase At1g01540 124 219 - -
Prci14g0271 461 FunFam Putative receptor-like serine/threonine-protein kinase 220 430 - -
Prci14g0271 461 ProSitePatterns Protein kinases ATP-binding region signature. 150 173 IPR017441 GO:0005524
Prci14g0271 461 CDD STKc_IRAK 150 416 - -
Prci14g0271 461 Gene3D Transferase(Phosphotransferase) domain 1 220 425 - -
Prci14g0271 461 SUPERFAMILY Protein kinase-like (PK-like) 126 416 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0271 Prci-Chr14 2054220 2058098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0271 32 418 Trihelix Transcription Factor Family AT1G70460 41.985 7.23e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci14g0271 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0271 - - gmx:100779420 637.491