Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0250 ATGGCCTCTGATTCCTCTTGGACACCTAAACAGAACAAGCTGTTTGAAAAGGCTCTTGCAAAATATGACAAGGACACTCCTGATCGATGGCACAATGTGGCTAAAGCTGTTGGTGGCAAATCTGCTGAGGAAGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTTAGACACATTGAGTCTGGTAGTGTTCCCATCCCCAACTACAAATCCACCGGCGCCAATGTTGACGAAGAAAAGAGGCTTCTGAAGTATCTTCAGCTTAATTGA 270 0.4444 MASDSSWTPKQNKLFEKALAKYDKDTPDRWHNVAKAVGGKSAEEVKRHYEILLEDLRHIESGSVPIPNYKSTGANVDEEKRLLKYLQLN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0250 89 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Prci14g0250 89 Pfam Myb-like DNA-binding domain 5 49 IPR001005 -
Prci14g0250 89 Gene3D - 1 66 - -
Prci14g0250 89 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 77 IPR044636 GO:0003700
Prci14g0250 89 CDD SANT 6 53 IPR001005 -
Prci14g0250 89 SMART sant 3 55 IPR001005 -
Prci14g0250 89 FunFam Transcription factor SRM1 1 66 - -
Prci14g0250 89 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Prci14g0250 89 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0250 Prci-Chr14 1971075 1972735 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g0250 Myb_DNA-binding 7.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0250 - - gmx:100785292 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0250 14 1971075 1972735 Prci14g0250 14 1971075 1972735 ECH