Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0249 ATGTTGCGTTGTCTGACCAGTTCGGAGAATCTTGCTGAGTCCTGCTCCGCTATGGCATTGTCAGAAAGGCAAAGAGACAGGATGAAATGGCAACAGCCACAGTCTCATCATCATCAGAACCAGAACTACTTTTCTGGAAGTGGGTTTGACGGTGGGTCCTCGCCTCTGCAACTTCAGAATTCTGGAGGATTGATGATGATGGTGAATGGCGGCGGCAGTGGAGGAAGTTCTGGGCTCGGTGAGGTGGTTGCTAATGCCGGTTCGGTGAAGCCCGACCCGTCTTGGGATAATGGGTGGTCCGAATTGGGCAAGGTCGACTTGCCTGGTCTGGGAGTCGTGTCTTCCGGATTTAACGTGAACTCTGTAGTTTCGAGGACTTCTAGCTGCCCGCCGTCTGTGGCAGCGTCGGCTGCAGCGACGGCGACAGAGAGGATGAGATCGACGAGTGGGAGAGAGAGCTTCAAGAAGAGGAAATCTGATAAAGCTCAGATCCCCAAGGTTGCAGAAAATGAGAAGAACAAGAAAAGCAAAACAAGTGGCGAGGAAGGGGAATCCAAAGTGACAACAGATAATAATGACAAGAATAGAGAAACATCTGCAGCATCTTCGAAAGAGAATTCGAAAACTTCTGAGGTTCAAAATCAAAAGCCTGACTACATTCATGTCCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCAGAAAGAGTTAGAAGGGAAAAGATTAGCGAGAGAATGAAATACTTGCAGGGTTTAGTACCAGGTTGTAATAAAATCACAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGGCAAGTAGAGTTTTTGTCAATGAAACTAGCTGCTGTAAACCCTAGGATTGACTTCAACATTGACGATCTGTTCACCAAAGAGGTTTATCCAGCTTGTACTCCTACGAGTTTTCCAGCCATTGATGTGACAGCTAATCCTGCTTATCTTCAGTTTGATCCAGCCCAACATGTTTCTTCATGTTGTGGATTAGATATGGGCATAAACCATCCAGATTTGGGGCTTCGAAGGACCATTGGTGCTCCTGTATCCTTCCCACCTGAAACATTTCTTGACTCATCTTGTTTCAATCAAATTCTGCCATTTTCAACCTGTGAAGCTGATTTGCAGAACCTGTACAATGTGGCTTTTGATCAAGCGAGAACAACCACGACGTCCTTTCCTTCTCAACCATTCACAGGCCTAATTGAAGCTAGCAATCTAAAGATGGAGATGTGA 1275 0.4612 MLRCLTSSENLAESCSAMALSERQRDRMKWQQPQSHHHQNQNYFSGSGFDGGSSPLQLQNSGGLMMMVNGGGSGGSSGLGEVVANAGSVKPDPSWDNGWSELGKVDLPGLGVVSSGFNVNSVVSRTSSCPPSVAASAAATATERMRSTSGRESFKKRKSDKAQIPKVAENEKNKKSKTSGEEGESKVTTDNNDKNRETSAASSKENSKTSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRIDFNIDDLFTKEVYPACTPTSFPAIDVTANPAYLQFDPAQHVSSCCGLDMGINHPDLGLRRTIGAPVSFPPETFLDSSCFNQILPFSTCEADLQNLYNVAFDQARTTTTSFPSQPFTGLIEASNLKMEM 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0249 424 MobiDBLite consensus disorder prediction 202 216 - -
Prci14g0249 424 SMART finulus 234 284 IPR011598 GO:0046983
Prci14g0249 424 MobiDBLite consensus disorder prediction 34 58 - -
Prci14g0249 424 MobiDBLite consensus disorder prediction 23 58 - -
Prci14g0249 424 Pfam Helix-loop-helix DNA-binding domain 232 279 IPR011598 GO:0046983
Prci14g0249 424 CDD bHLH_AtBPE_like 218 303 - -
Prci14g0249 424 FunFam Basic helix-loop-helix transcription factor 225 297 - -
Prci14g0249 424 Gene3D - 225 298 IPR036638 GO:0046983
Prci14g0249 424 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 137 323 IPR024097 GO:0006355
Prci14g0249 424 MobiDBLite consensus disorder prediction 139 236 - -
Prci14g0249 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 297 IPR036638 GO:0046983
Prci14g0249 424 MobiDBLite consensus disorder prediction 148 201 - -
Prci14g0249 424 MobiDBLite consensus disorder prediction 218 236 - -
Prci14g0249 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 228 278 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0249 Prci-Chr14 1952672 1955391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0249 147 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 50.661 1.84e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g0249 HLH 9.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0249 - - pcin:129293639 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0249 14 1952672 1955391 Prci14g0249 14 1952672 1955391 ECH