Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci14g0192 | ATGTTGAGGGAGATAAGAGAAGGAAGAGGAAGAGGAGCCACCAAGTGCCAAGACTGTGGGAACCAGGCAAAGAAGGGTTGCGAATTCATGAGATGCAGAACTTGCTGTAACAACAAAGCCTTTAGCTGCCAAACTCATATCAACACCACTTGGGTTCCTATCTGTAGGAGGCGCCACCTTCATCAACCTCACCATCAAACCCCCTCTCACAACAGTCCTCCACTAGGACTAGAGGAGTGGAATAAGCTTCCGGCTGTGATGAGTTCGAAGGCAGTGTTTCGTTGCGTTTGGGTGCGTTCTGGGGATGGTACGGTTGACGAATACGCATACCAAACGTGTGTGAGCATAGGAGGACGTGTGTTCAGTGGTGTTCTTTATGATCAAGGCCGTCAAAGCTTCGACTACAACAACGTTGGTCAAAGTTCCAAAGACCCCTTGAATCTGAATCATCATTCTCATGATGATCAGAACCACCATTTCATCCGCAGTACAACTTCAATGATTCAATCCCATGAGGCTGCCACTGTGCCACCATCATCTGCGGAGCATTTTTCTTCTTCCTCGTATCCTCTTTCTCTTGCAACCTTTAGGCCTGCTATATCATATTTTACGCCACCAAAGACCTCCTAG | 630 | 0.4762 | MLREIREGRGRGATKCQDCGNQAKKGCEFMRCRTCCNNKAFSCQTHINTTWVPICRRRHLHQPHHQTPSHNSPPLGLEEWNKLPAVMSSKAVFRCVWVRSGDGTVDEYAYQTCVSIGGRVFSGVLYDQGRQSFDYNNVGQSSKDPLNLNHHSHDDQNHHFIRSTTSMIQSHEAATVPPSSAEHFSSSSYPLSLATFRPAISYFTPPKTS | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci14g0192 | 209 | Pfam | Domain of unknown function (DUF702) | 13 | 69 | - | - | |
Prci14g0192 | 209 | Pfam | Domain of unknown function (DUF702) | 81 | 131 | - | - | |
Prci14g0192 | 209 | NCBIfam | putative zinc finger domain, LRP1 type | 15 | 57 | IPR006510 | - | |
Prci14g0192 | 209 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 8 | 190 | IPR007818 | GO:0003700|GO:0006355 | |
Prci14g0192 | 209 | NCBIfam | LRP1 C-terminal domain | 83 | 129 | IPR006511 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci14g0192 | Prci-Chr14 | 1614170 | 1615566 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci14g0192 | 15 | 129 | C2H2 Transcription Factor Family | AT2G21400 | 51.128 | 2.44e-38 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Prci14g0192 | DUF702 | 6.8e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci14g0192 | - | - | pcin:129292149 | 443.736 |