Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0189 ATGAAGATCCAATGTGATGTGTGCGAGAAAATGGAAGCTTCAGTGTTCTGTGCTGCAGACGAAGCTGCTCTCTGCCATGGATGTGATTCCAGCATCCACCACGCCAACAAGCTCGCTGTCAAACACATGCGCTTCTCTCTTCACCACCCCACCTCTAAAGATTCCCCTCTCTGTGATATCTGCCAAGAGAAGCGAGCGTATCTATTTTGCAAAGAAGACAGGGCAATACTATGCAGAGAATGTGACCTTAGCATCCACAGAGCCAACGAGCACACCCAGAAACACAGCAGGTTTCTTCTCACGGGCGTGAAGCTTGCTGATTCTTCCTCTGGGGATCCATCTTCATCTTCCAGCAATGTTATCGCTACTGAGCATAAGAGAGTCGATAATGGATGTCGTGGAGCAAGAAGATCGTGTCGGAATTCTAACATGAACAGCAGACCCAGATGGGATTGCAATAATAATAATAATAATGAGAATTTCAGTTCTTCAAATTCAGTAGTGAATTCTGATACTATGATTAGCGACACAGAAGCGGTTTCGACGAGCAGCTTTTCAGAATACTTGATTGAGACGATTCCTGGGTATTGCTTTGAAGACCTCATTGATTCTTCGTTTCCACCTCTCTAA 630 0.4508 MKIQCDVCEKMEASVFCAADEAALCHGCDSSIHHANKLAVKHMRFSLHHPTSKDSPLCDICQEKRAYLFCKEDRAILCRECDLSIHRANEHTQKHSRFLLTGVKLADSSSGDPSSSSSNVIATEHKRVDNGCRGARRSCRNSNMNSRPRWDCNNNNNNENFSSSNSVVNSDTMISDTEAVSTSSFSEYLIETIPGYCFEDLIDSSFPPL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0189 209 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Prci14g0189 209 SMART bboxneu5 4 47 IPR000315 GO:0008270
Prci14g0189 209 SMART bboxneu5 53 100 IPR000315 GO:0008270
Prci14g0189 209 CDD Bbox1_BBX-like 5 47 - -
Prci14g0189 209 Gene3D Classic Zinc Finger 1 99 - -
Prci14g0189 209 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 205 - -
Prci14g0189 209 CDD Bbox1_BBX-like 57 100 - -
Prci14g0189 209 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci14g0189 209 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Prci14g0189 209 FunFam B-box zinc finger protein 21 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0189 Prci-Chr14 1586591 1588294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0189 1 207 C2C2-CO-like Transcription Factor Family AT1G75540 51.429 5.83e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci14g0189 zf-B_box 9.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0189 - - gmx:100786372 258.455