Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0188 ATGAAGATCCAATGTGATGTGTGCGAGAAAATGGAAGCTTCAGTGTTCTGTGCTGCAGACGAAGCTGCTCTCTGCCATGGATGTGATTCCAGCATCCACCACGCCAACAAGCTCGCTGTCAAACACATGCGCTTCTCTCTTCACCACCCCACCTCTAAAGATTCCCCTCTCTGTGATATCTGCCAAGAGAAGCGAGCGTATCTATTTTGCAAAGAAGACAGGGCAATACTATGCAGAGAATGTGACCTTAGCATCCACAGAGCCAACGAGCACACCCAGAAACACAGCAGGTTTCTTCTCACGGGCGTGAAGCTTGCTGATTCTTCCTCTGGGGATCCATCTTCATCTTCCAGCAATGTTATCGCTACTGAGCATAAGAGAGTCGATAATGGATGTCGTGGAGCAAGAAGATCGTGTCGGAATTCTAACATGAACAGCAGACCCAGATGGGATTGCAATAATAATAATAATAATGAGAATTTCAGTTCTTCAAATTCAGTAGTGAATTCTGATACTATGATTAGCGACACAGAAGCGGTTTCGACGAGCAGCTTTTCAGAATACTTGATTGAGACGATTCCTGGGTATTGCTTTGAAGACCTCATTGATTCTTCGTTTCCACCTCTCTGTAAGAATCAGGATAAGCATGATCCAACGTTTGGTGATGAAGAAGAAGAAGAAGAAGAAGAAGATCTACAATTTGGAATGTGTTTATATCCAAAAGCAAAAGCTGCAGAAGAAATCTTGAAATGGAAGCAAAATGGCTTTCGATAA 774 0.4328 MKIQCDVCEKMEASVFCAADEAALCHGCDSSIHHANKLAVKHMRFSLHHPTSKDSPLCDICQEKRAYLFCKEDRAILCRECDLSIHRANEHTQKHSRFLLTGVKLADSSSGDPSSSSSNVIATEHKRVDNGCRGARRSCRNSNMNSRPRWDCNNNNNNENFSSSNSVVNSDTMISDTEAVSTSSFSEYLIETIPGYCFEDLIDSSFPPLCKNQDKHDPTFGDEEEEEEEEDLQFGMCLYPKAKAAEEILKWKQNGFR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0188 257 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Prci14g0188 257 SMART bboxneu5 4 47 IPR000315 GO:0008270
Prci14g0188 257 SMART bboxneu5 53 100 IPR000315 GO:0008270
Prci14g0188 257 Gene3D Classic Zinc Finger 1 97 - -
Prci14g0188 257 CDD Bbox1_BBX-like 5 47 - -
Prci14g0188 257 FunFam B-box zinc finger protein 21 1 98 - -
Prci14g0188 257 CDD Bbox1_BBX-like 57 100 - -
Prci14g0188 257 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci14g0188 257 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Prci14g0188 257 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0188 Prci-Chr14 1586343 1588294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0188 1 207 C2C2-CO-like Transcription Factor Family AT1G75540 51.675 4.89e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci14g0188 zf-B_box 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0188 - - gmx:100800981 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0188 14 1586343 1588294 Prci14g0188 14 1586343 1588294 ECH
Prci14g0188 14 1586343 1588294 Prci5g0030 5 898830 901454 ECH
Prci14g0188 14 1586343 1588294 Prci10g0194 10 1274601 1277850 ECH