Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0115 ATGGGAAGGTCCCCTTGCTGTGAGAAGGCTCACACCAACAAAGGTGCCTGGACCAAGGAGGAAGACGATCGCCTCATCTCTTATATCCGCGCTCACGGCGAGGGCTGCTGGCGCTCCCTCCCCAAGGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTATCTCCGCCCTGACCTTAAACGCGGTAATTTCACCCACGACGAAGACGAGCTCATCATCAAACTCCACAGTCTTCTCGGCAACAAGTGGTCTCTCATAGCCGGAAGATTGCCTGGCAGGACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAGGAGGAAGCTTTTGAACAGGGGAATCGATCCTTCCACTCACCGCCCCCTCAACGTGTCCGCCGATTCTGCCCACCCCAATCAAGACGCCGCCACCATCTCTTTCTCCAAACAACAGGATAGTGATGACGGCAAGGCGAGCGTGTTCGCCGACCTTCACAGGGATGCGAAAATGGGTGTGGCCGTAGAGCGATGCCCTGACCTGAACTTGGAGCTCACCATCAGTCCTCCTCATCAGAACCAGGAGGCGGAGGATCGAGTTCAGCCCATCCTCAAGAGCGGCGGAGGAGGGAGAAGCCTCTGTTTCGCTTGCAGTCTGGGTTTGCAGAACAGCAAGGAGTGCAGCTGTGGAATCGTTGGCAACATTAGTGGCGGCACTAGCGGGAGTAGTAGCGCCGGCGGCTATGATTTCTTGGGGTTGAAAAGTGCTGTTTTGGATTACAGAAGCTTGGAGATGAAATGA 798 0.5652 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNVSADSAHPNQDAATISFSKQQDSDDGKASVFADLHRDAKMGVAVERCPDLNLELTISPPHQNQEAEDRVQPILKSGGGGRSLCFACSLGLQNSKECSCGIVGNISGGTSGSSSAGGYDFLGLKSAVLDYRSLEMK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0115 265 FunFam MYB-related transcription factor 13 66 - -
Prci14g0115 265 CDD SANT 69 112 IPR001005 -
Prci14g0115 265 Gene3D - 14 66 - -
Prci14g0115 265 CDD SANT 16 61 IPR001005 -
Prci14g0115 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci14g0115 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci14g0115 265 FunFam Myb transcription factor 68 137 - -
Prci14g0115 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci14g0115 265 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci14g0115 265 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 146 - -
Prci14g0115 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci14g0115 265 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Prci14g0115 265 SMART sant 66 114 IPR001005 -
Prci14g0115 265 SMART sant 13 63 IPR001005 -
Prci14g0115 265 Gene3D - 69 143 - -
Prci14g0115 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0115 Prci-Chr14 933626 934843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0115 1 265 MYB Transcription Factor Family AT4G38620 60.959 3.73e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci14g0115 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0115 K09422 - jre:109006592 387.882