Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0079 ATGAACACTGTCACGCAAAACCTATCTGAGCAACTGAGGCCCCTTGTGGCTTTGAATAGCTGGGACTATTGTGTTCACTGGAAATTAAGCAAAGACCGAAGGTCTCTTTTTTGGACGGGATGCTCTTGTGCTGGGACTGAAAGTAGACAAAGTGGTGGAGACAAACTTCTTTCTCCTGTTTCTTCAGTCGCTTCGTGCAGGGATACCATGTTTCGTCACCCCAGAACAGAGTCCTGTGCTTTACTTTCCCGACTTCCCGTTTTCATAACTTTAGATTCAGGGATTCATGCAGAGACATTGTTATCCAAACAATGCAAATGGTTGAACTATACCAATAGCTTAGATTCTAATACTTCTGAGAAACCAGTTGGGACCCAAGTTTTGATTCCGGTGCCGGGTGGACTAGTTGAGCTGTTTGCAACGAAGCAAGTGCTGGAAGATCATCATGTGATCGATTTTGTCACATCCCGAGCAGCGGAGAAGACTGCATCCAAGAACCTTGAGGCAGAGTACATGAGGAGGGAGAGGCTCACTAAGAACTTGTTAAGTCTAAGGCCTTTGGTTCCCAGAATTTCTAAGCCAGACAGTGCGTCTCTTCTTGATGACACAATTGAGTTCGTGAAGGATTTGCAGAAGCAAGTGAAAGAGCAGCAAGATAAGCTCTTGCAGCTCGAGAAAATTTCAGAAATGGACGAACCACCACCAGCAGCAGCAGATAATGTATATGGGGTTGAAATGGGACCAAAAGCCAATCAAATGAAGACCCAAAATGGCTGTATCTGGAAGCCAAAACATGAATTTGATGCTCCGAACCATAAGCAAACACAACAAATGGAGGCGCAAGTGGAAGTGGCAGTGATAAAGGGGAATGAGTTGAAAGTGAAGGTGTTGTGTGGGCACAGACCTGGTGGGTTCGTGAAACTGATGGAGGCATTCCACTCTCTGGGCCTCCACGTCGTCCGTGCTAATGTCACTACCGACCAAGGTCTTGTTTCCAACATTTTCAGAGTGCAGATGAAGGAGAAAGAATTGGTAAAAGCTGAAGAAGTTAGGGAGTCACTAGTGGAACTTATGAGTTTAAGTACTGCGGCATCCCAAATTGAAGGGGCAAGGGTCTCAATGCTATCACTTTGCATCTTGCTCCTATTTCTTTGTCTGTATGATTACTATGTCCATGTGCCCGCAATATATAAAAAATAG 1200 0.45 MNTVTQNLSEQLRPLVALNSWDYCVHWKLSKDRRSLFWTGCSCAGTESRQSGGDKLLSPVSSVASCRDTMFRHPRTESCALLSRLPVFITLDSGIHAETLLSKQCKWLNYTNSLDSNTSEKPVGTQVLIPVPGGLVELFATKQVLEDHHVIDFVTSRAAEKTASKNLEAEYMRRERLTKNLLSLRPLVPRISKPDSASLLDDTIEFVKDLQKQVKEQQDKLLQLEKISEMDEPPPAAADNVYGVEMGPKANQMKTQNGCIWKPKHEFDAPNHKQTQQMEAQVEVAVIKGNELKVKVLCGHRPGGFVKLMEAFHSLGLHVVRANVTTDQGLVSNIFRVQMKEKELVKAEEVRESLVELMSLSTAASQIEGARVSMLSLCILLLFLCLYDYYVHVPAIYKK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0079 399 ProSiteProfiles ACT domain profile. 293 374 IPR002912 -
Prci14g0079 399 CDD ACT_UUR-ACR-like 294 358 - -
Prci14g0079 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 210 IPR011598 GO:0046983
Prci14g0079 399 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 156 IPR025610 -
Prci14g0079 399 SUPERFAMILY ACT-like 292 357 IPR045865 -
Prci14g0079 399 Coils Coil 200 227 - -
Prci14g0079 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 226 IPR036638 GO:0046983
Prci14g0079 399 Coils Coil 337 357 - -
Prci14g0079 399 SMART finulus 167 216 IPR011598 GO:0046983
Prci14g0079 399 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 158 358 - -
Prci14g0079 399 Gene3D - 152 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0079 Prci-Chr14 739695 741917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0079 164 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 42.211 2.19e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0079 - - pcin:129292736 787.719