Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0049 ATGACCTCCGCCAGCAGCCCCACCTACAGCGGAGAGGTGATCGTCAAGATCGACGGCGGCGACTCTAAATCTTCCAAACCAACCTGCTCCCAGGGCGAAAACAAGATTCGGCGGGATCCCAGCTACGACTTCTGGAAAGAAGGTGACATCCCCACCACCAGGCATGGCCAGAGTTTTGATTTCCAGCAACCTGCCCCGAAACCCGAGGACCCTCCCTCAATGCTCATTGGTAAATTCTTGCACAGACAGAAGCTCTCCGGCGACATGTCCCTCGACATGGATTTAGAAATGGACGAGCTCCAACAAGATAATTACCGGACGCATTTGCCTCCGCTCGACGAGACTGGGCCGGTGAGTTTCTCCAGGGAGCTCAAGGTCTCCTTCGAAGAACCGCCTCCTAATTCCACCGAGGAACTGAGCGATTCCGTTCGACGAAGGTACAAGGATACCCCGATCATGGAGGAATACCATAAACCACCACAACCACCGCAGCCCGACCGTCGAGGCACCGCTCAGAATATTCATCCGGCAAACGGAGACGGCGAGGTTGTGAGGTGCACCTCTAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCGGGTTTGCTCAGGGCGAAGACCAAATCAAGACTGATTGACCCGCCGGACGAGCCAGAACGGAAATCCGGTCGGATTCAGAAATCAGGGCAGATGCTGTCAGGTTTGCAACCAGGGAATAATAAGAAAGGGGAGGAGGAGGAGGAAGATCCGTTCATGGAAGAGGATCTCCCGGATGAGTTCAAGAAGACCAAATTCAGCATTTGGGTTCTACTAGAATGGTTGAGTTTGATTTCAATAGTCGCGGCATTGATAACCACTCTCTGCATCCCATTCTTGAGGAAGAAGAATCTGTGGAAGCTGAAGTTATGGAAATGGGAGGTGATGGTTTTGGTTCTGATTTGCGGTCGGTTAGTTTCGGACTGGGTTATTCGGATCGCAGTGTTCTTCATCGAAAGGAATTTCCTCCTGCGTAAGAGGGTGCTGTACTTTGTTTATGGGGTGAAGAAGGCAGTTCAGAACTGCCTATGGTTGGGTCTGGTTTTAATCGCATGGCACTCTCTGTTCGATCAGAGAGTGGAAAGGGAGACGAAAAACGACTTCCTAGAATACGTGACCAAGATCTTGATCTGCTTCTTGGTGGGTACTCTGGTGTGGCTGGTGAAAACTCTGATGGTCAAGGTTCTGGCTTCTTCATTCCACGTGAGCACCTACTTCGACAGGATACAGGAATCGTTGTTCAATCAGTTTGTGATCGAGACACTGTCAGGGCCACCACTGGTAGAGCTTCAGAGGCAGGAGGAGGAGGAGGAGAAGTTGGCGGAGGAGGTGATGAAGCTTCAGAACGCAGGAATTACCATACCTCCTGATCTGAGGGCATCGGCCTTCTCTTCTCTCAACAAGAGTCCAAAGGTGAACAAGAGTGGGATGCTTCTCAAGAGTCCTCATCTGAAAAGTGGCAAGTTTTCTCGACCACTTTCCAAGAAATCAGATGACGGGATACCAATTGATTACTTGCACAAGTTGAATCCCAGGAATGTGTCCGCATGGAACATGAAAAGGCTGATGAATATTGTGCGACACGGAGCTCTTTCCACGCTTGACGAGCAGATTCAAGGTTCGACCCATGAAGATGAACAGATCACGCAAATCCGAAGCGAGAATGAGGCCAAAGCGGCGGCCAAAAAGATATTTCAGAATGTTACCAGGCGGGGATCCAGGTTCATATACCTCGAGGACTTGTTGCGCTTCATGAGAGAAGATGAAGCCGTCAAAACCTTCAGTCTATTCGAAGGAGCGCCTGATACTGGGAAAATCAACAAATCGGCCTTGAAGAACTGGGTGGTGAACGCGTTTCGAGAAAGAAGAGCGCTTGCTTTGACATTGAACGACACGAAAACGGCAGTTAACAAACTTCATCGAATGCTCAATTTTTTAGTGGCCATCGTCATTCTGGTTATTTGGCTCTTAATACTGGAAATTGCCACCAGCAAATTTCTTGTCGTCGTGAGCTCCCAGCTCGTTTTGGCGGCATTCATATTCGGAAATACCTGCAAGACCATATTCGAAGCCATCATTTTCTTATTTGTCATGCACCCTTTTGACGTGGGAGATAGATGCGAAGTTGACGGCATTCAGATGATTGTGGAAGAGATGAACATATTGACAACCATATTTTTGAGATACGACAATTTGAAGGTAACGATCCCTAACAGTGTTCTGGCTACCAAGCCCATATATAATTTCTACCGGAGTCCCGACATGGGAGAGGCTGCGGAGTTCTTGGTACATTTATCTACCCCAGCAGAAAAGATCACACTCATCATAAACAAAATACAAAGTTACATCGAGAGCAAGAAGGAGTTCTGGTATCCGTCACCCATGATAGTGTACAAGGACGCTGACCAGCTCAACATGATAAGAATCGCAGTGTGGCCGAGTCACAGAATGAACCACCAAGACATGGGGGAAAGATTTGTGAGAAGATCCCTTCTGATTGAGGAGATGATCAAGATCTTCCGGGAGGTCGACATCCACTTCCGCCTCCTTCCCCTTGATATCAGTGTTCGAAGCATGCCCACCACCTCCGACCGCCTTCCTCCCAGTTGGGCCACTGCCACCACTCTTGGCTAA 2676 0.4914 MTSASSPTYSGEVIVKIDGGDSKSSKPTCSQGENKIRRDPSYDFWKEGDIPTTRHGQSFDFQQPAPKPEDPPSMLIGKFLHRQKLSGDMSLDMDLEMDELQQDNYRTHLPPLDETGPVSFSRELKVSFEEPPPNSTEELSDSVRRRYKDTPIMEEYHKPPQPPQPDRRGTAQNIHPANGDGEVVRCTSNASFERNLSLQRKSGLLRAKTKSRLIDPPDEPERKSGRIQKSGQMLSGLQPGNNKKGEEEEEDPFMEEDLPDEFKKTKFSIWVLLEWLSLISIVAALITTLCIPFLRKKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVFFIERNFLLRKRVLYFVYGVKKAVQNCLWLGLVLIAWHSLFDQRVERETKNDFLEYVTKILICFLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSLNKSPKVNKSGMLLKSPHLKSGKFSRPLSKKSDDGIPIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGSTHEDEQITQIRSENEAKAAAKKIFQNVTRRGSRFIYLEDLLRFMREDEAVKTFSLFEGAPDTGKINKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIVILVIWLLILEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEVDGIQMIVEEMNILTTIFLRYDNLKVTIPNSVLATKPIYNFYRSPDMGEAAEFLVHLSTPAEKITLIINKIQSYIESKKEFWYPSPMIVYKDADQLNMIRIAVWPSHRMNHQDMGERFVRRSLLIEEMIKIFREVDIHFRLLPLDISVRSMPTTSDRLPPSWATATTLG 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0049 891 Gene3D - 714 763 IPR023408 -
Prci14g0049 891 MobiDBLite consensus disorder prediction 32 50 - -
Prci14g0049 891 FunFam Predicted mechanosensitive ion channel 714 763 - -
Prci14g0049 891 PIRSF Memb_At2g17000 2 889 IPR016688 -
Prci14g0049 891 MobiDBLite consensus disorder prediction 211 226 - -
Prci14g0049 891 Pfam Mechanosensitive ion channel 656 861 IPR006685 GO:0016020|GO:0055085
Prci14g0049 891 SUPERFAMILY Sm-like ribonucleoproteins 704 763 IPR010920 -
Prci14g0049 891 MobiDBLite consensus disorder prediction 1 75 - -
Prci14g0049 891 Coils Coil 441 464 - -
Prci14g0049 891 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 884 IPR016688 -
Prci14g0049 891 MobiDBLite consensus disorder prediction 207 255 - -
Prci14g0049 891 MobiDBLite consensus disorder prediction 139 155 - -
Prci14g0049 891 MobiDBLite consensus disorder prediction 107 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0049 Prci-Chr14 580541 584870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0049 12 889 Mechanosensitive Ion Channel Family AT1G78610 56.718 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0049 K22048 - gmx:102665658 1188.71