Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0048 ATGGTAATGGATCAGGGTGACCAGGACGGTGCAGGTAGAGTACCCGATACGTTGTCAATGCCTCAGAGTCGTCAACAGAGCCAGAAGCTCAAAGTGTACTGTGAAGTTCTTCGTCGCCTCAAGAATTCCAGCAACGACGAGGCTATACAGCCTGACTTCGATCATCAACTTTGGGCTCACTTCAACCGCCTCCCAACACGATATGCGTTGGATGTTAATGTGGAAAGGGCGGCAGATGTTCTCACGCACAAGAGATTGCTGCGTTTGGCTCATGACCCTGCTCATAGGCCTGCAATTGAAGTTCGCCTAGTCCAGATTTATCCCATATCTGATGGAAATTCCGCTGACTCCATCCATCCAGATGTACCTAGGGAAGAAGCTTGTCAAACCTCTCCAAATTACCCAAGGAGACTGAGTGTTCATCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCCCTGGCACTTGAAGCTGATAAATCTGAAGACGAGGAACACTCTGTGCATGGCAGTGCTAAATATTCTCAGCCCATGCATGAAATCACTTTCTCTACAGATGACAAGCCAAAGCTTCTGAGTCAGTTGACTTCTTTGCTTGCTGAAGTTGGTTTAAACATCAGAGAGGCACATGCCTTTTCCACTACTGATGGTTACTCACTAGACGTGTTTGTTGTTGATGGATGGCCCTATGAGGAAACACAGCAGCTTAAAGAAGCTTTGGAAAAAGAAGTAATGTTGATTGAGAGGCACGCGTTTCCTATTCAACAATCAGAATTTTATGTTGCTAAGACTGATCGAATGGGAATGAAATGTGAAGAAGCTTATTTGGTGATACCAAACGATGGGTCAGATGTTTGGGAAATAGAGCCTAAACATTTGAAATATGGAAATAAAATTGCATCTGGGTCATTTGGTGAACTATTTAGAGGTACATATTGTAGTCAAGATGTGGCCATTAAAGTTCTCAAGGCTGAGAATTTAAGTTCAGATTGGAAGAAGGAGTTTGCCCAGGAAGTTTATATCATGAGAAAGGTTAGGCACAAGAATGTTGTGCAATTTATTGGAGCATGTACAAAGCCACCACACTTTTGCATAATAACAGAATTTATGTGTGGTGGAAGTGTGTATGACTATTTGCATAAGCAGAAGGGCGTTTTCAAATTTCCAACCCTGCTCAAAGTAGCGATTGATGTTTCCAAGGGAATGAACTACTTGCACCAGAATGATATTATCCATAGAGATTTGAAGGCTGCTAATCTCTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTCGGTGTAGCTAGAGTGAAAGATCAATCCGGAGTTATGACAGCAGAAACTGGCACATACCGATGGATGGCACCTGAGGTTGTAGAACACAAACCATACGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTAGTTTTATGGGAATTGCTCACTGGAAAGCTTCCATATGAATATTTGACCCCACTACAGGCAGCAATAGGAGTGGTTCAAAAGGGCCTACGACCCACGATCCCCAAGAACACTCATCCAAAATTTATTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCAACATTAAGGCCTGATTTCTCTGAAGTTATTGAGATCCTGCAGGAATTAGCTAACGAGCAAGCTGGGAATCATGGAGAGGAGAAGCGAAGGGAGAGATCTGCAGGATTTTTTTCTGCCCTCAGACGAGGCCGAGGTCATCACTGA 1734 0.4354 MVMDQGDQDGAGRVPDTLSMPQSRQQSQKLKVYCEVLRRLKNSSNDEAIQPDFDHQLWAHFNRLPTRYALDVNVERAADVLTHKRLLRLAHDPAHRPAIEVRLVQIYPISDGNSADSIHPDVPREEACQTSPNYPRRLSVHPPPAFGSSPNLEALALEADKSEDEEHSVHGSAKYSQPMHEITFSTDDKPKLLSQLTSLLAEVGLNIREAHAFSTTDGYSLDVFVVDGWPYEETQQLKEALEKEVMLIERHAFPIQQSEFYVAKTDRMGMKCEEAYLVIPNDGSDVWEIEPKHLKYGNKIASGSFGELFRGTYCSQDVAIKVLKAENLSSDWKKEFAQEVYIMRKVRHKNVVQFIGACTKPPHFCIITEFMCGGSVYDYLHKQKGVFKFPTLLKVAIDVSKGMNYLHQNDIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVVEHKPYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFIELLERCWQQDPTLRPDFSEVIEILQELANEQAGNHGEEKRRERSAGFFSALRRGRGHH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0048 577 CDD ACT_TyrKc 179 245 - -
Prci14g0048 577 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Prci14g0048 577 MobiDBLite consensus disorder prediction 115 135 - -
Prci14g0048 577 Coils Coil 231 251 - -
Prci14g0048 577 Gene3D Phosphorylase Kinase; domain 1 284 372 - -
Prci14g0048 577 SMART serkin_6 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0048 577 MobiDBLite consensus disorder prediction 1 26 - -
Prci14g0048 577 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 SUPERFAMILY Protein kinase-like (PK-like) 280 543 IPR011009 -
Prci14g0048 577 ProSiteProfiles Protein kinase domain profile. 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g0048 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Prci14g0048 577 Pfam Protein tyrosine and serine/threonine kinase 294 543 IPR001245 GO:0004672|GO:0006468
Prci14g0048 577 CDD STKc_MAP3K-like 300 543 - -
Prci14g0048 577 SUPERFAMILY ACT-like 179 243 IPR045865 -
Prci14g0048 577 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Prci14g0048 577 Gene3D Transferase(Phosphotransferase) domain 1 373 567 - -
Prci14g0048 577 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 142 550 - -
Prci14g0048 577 Pfam ACT domain 181 243 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0048 Prci-Chr14 558343 575288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0048 10 573 MAP Kinase Kinase Kinase AT4G35780 61.947 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci14g0048 PK_Tyr_Ser-Thr 2.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0048 - - qsa:O6P43_002157 883.634