Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0037 ATGGCAATGGCAGCAATACCCAGCTGGGATCCATACAAAAACAAAAGAGACAGGAATATGGGCGACATACAACTGCCGGGCTTCCGGTTTCACCCCACGGAGGAAGAACTGGTGGACTTCTATCTGAAGAATATGATCGGCGGAAACAAATTGTGCCTGGACATCATCGATCTGGTGAATATCTATCAGCACGAGCCCTGGGACCTGCCCGGCATGGCCAGGGTGGGAGAGAGAGAGTGGTACTTCTTCGTGCCCAGAGACAAGAAGCAGGGAAGCGCCGCCCGGCCCAACCGCACCACCCAGAAGGGCTTCTGGAAAGCCACCGGCTCCGACCGCAAGATCCTCAGCTTCTCCCACCACAAGCGCCTCATCGGCCTCCGCAAGACTCTTGTCTTCTACCAGGGAAGAGCTCCCCGCGGCCGCAAGACCGATTGGGTCATGAACGAGTTCCGCCTCCCGGACACTTTCACCTTCCCTAACAAGGACGCCGTAGTGCTGTGCAAGATCTACCGCAAGGCTACGTCGTTGAAGGAGCTGGAAGAGAGGGCATCGCGATGCGAGGAGTCGTCGTCGTCGTCCGTGCCGACGCTCCGACCGAAGAATGAACCGGTGGAAGAGACGGCGGATCCTGGGCTGAACCTTCCGGAGTTGCAGTTACCCATGAACACTGGGTGGACCCAAGACCCCTCTTGGGCTCAGTTAAACAGTCCCTGGTTCCAATGTCTGACTCCTCTTTCCGTTTCCAACCTCCTCAACTGCTAA 762 0.5709 MAMAAIPSWDPYKNKRDRNMGDIQLPGFRFHPTEEELVDFYLKNMIGGNKLCLDIIDLVNIYQHEPWDLPGMARVGEREWYFFVPRDKKQGSAARPNRTTQKGFWKATGSDRKILSFSHHKRLIGLRKTLVFYQGRAPRGRKTDWVMNEFRLPDTFTFPNKDAVVLCKIYRKATSLKELEERASRCEESSSSSVPTLRPKNEPVEETADPGLNLPELQLPMNTGWTQDPSWAQLNSPWFQCLTPLSVSNLLNC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0037 253 ProSiteProfiles NAC domain profile. 24 172 IPR003441 GO:0003677|GO:0006355
Prci14g0037 253 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 189 - -
Prci14g0037 253 MobiDBLite consensus disorder prediction 184 216 - -
Prci14g0037 253 SUPERFAMILY NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Prci14g0037 253 Pfam No apical meristem (NAM) protein 26 152 IPR003441 GO:0003677|GO:0006355
Prci14g0037 253 Gene3D NAC domain 33 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0037 Prci-Chr14 458600 459892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0037 22 245 NAC Transcription Factor Family AT2G17040 51.273 4.08e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci14g0037 NAM 2.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0037 - - pcin:129293873 508.064