LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g0021	ATGGGCGGCTCAAAGGAGACCCAATACCGTCTGGGTTCACTGATGCCTTCATCAAATCTTCAAGGCGGTTCAAGAATGGACGGCATCAAGCTCATGAAGGAGATGACACAGAATAATCGTCGGGCTCTGAGCAATATCAATCAGAATATAATGGAGGCTACTCATAAGCCTTGTGTGGTCAACAGAAGAGATCCATCAGGAAGATATACAGAACAGACAGTTCAGCACTGCCCTGAAGAAACCAAAAAACGAAGCTTGTTGGCTCCGAACCCTAGTTACCAGTTGGACGGTGATATAACAGATATTGAAGAATACGAGGGTGCTGGTGACAATGGAGTTCCAGTGTTTGTTAGGCACACAGAAGCAATGCTGGACGAAATTGAGAGATTAAATTCTAGCTGCGTCTCTCCAGATTACATGGCTGGCCAGTTTGACATCAATGAGAAGATGAGGGCTATCCTCGTTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACATTGTACCTTACCGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCGGTGATCAGAAAGAAGCTTCAGTTGGTCGGTGTAACAGCCATGCTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCCACTGTTGAGGATTTCATCTTGATAACCGACAAGGCGTACAAAAGGGAAGAAGTTCTAAATATGGAGAAGTTAATGATGAACACGTTACAGTTCAGCCTGTGTGTGCCTACTCCGTATGTGTTCATGAGGAGATTTCTTAAAGCTGCTCAGTCTGACAAAAAGCTGGAGCTCTTGTCATCCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAGGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATTTACACAGCTCAGTGTAGTCTGTATCAGTATAAGCAGTGGACAAAGACTAGTGACTGGTATACTAATTACTCGGAAGACCAGCTTTTAGAGTGCTCAAGAATGATGGTTACTTTCCATCACAAGGCTGGGACTGGTAAACTCACAGGAGTTTATAGGAAGTACACTACGTGCAAGTATGGTTATGCCGCAAATATGAAACCAGCCCTTTTTTTGCTGGACTCTGACTGA	1122	0.443	MGGSKETQYRLGSLMPSSNLQGGSRMDGIKLMKEMTQNNRRALSNINQNIMEATHKPCVVNRRDPSGRYTEQTVQHCPEETKKRSLLAPNPSYQLDGDITDIEEYEGAGDNGVPVFVRHTEAMLDEIERLNSSCVSPDYMAGQFDINEKMRAILVDWLIEVHYKFELMEETLYLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLNMEKLMMNTLQFSLCVPTPYVFMRRFLKAAQSDKKLELLSSFIIELCLVEYKMLRFSPSLLAAAAIYTAQCSLYQYKQWTKTSDWYTNYSEDQLLECSRMMVTFHHKAGTGKLTGVYRKYTTCKYGYAANMKPALFLLDSD	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g0021	373	CDD	CYCLIN_AtCycB-like_rpt2	249	365	-	-
	Prci14g0021	373	SMART	cyclin_7	156	240	IPR013763	-
	Prci14g0021	373	SMART	cyclin_7	253	335	IPR013763	-
	Prci14g0021	373	Gene3D	-	132	361	-	-
	Prci14g0021	373	Pfam	Cyclin, N-terminal domain	132	247	IPR006671	-
	Prci14g0021	373	MobiDBLite	consensus disorder prediction	10	24	-	-
	Prci14g0021	373	FunFam	G2/mitotic-specific cyclin-1	236	361	-	-
	Prci14g0021	373	MobiDBLite	consensus disorder prediction	1	24	-	-
	Prci14g0021	373	SUPERFAMILY	Cyclin-like	127	247	IPR036915	-
	Prci14g0021	373	ProSitePatterns	Cyclins signature.	151	182	IPR006671	-
	Prci14g0021	373	PIRSF	Cyclin_A_B_D_E	93	373	IPR046965	GO:0016538\|GO:0044772
	Prci14g0021	373	PIRSF	Cyclin_A_B_D_E	7	95	IPR046965	GO:0016538\|GO:0044772
	Prci14g0021	373	Pfam	Cyclin, C-terminal domain	249	364	IPR004367	-
	Prci14g0021	373	Gene3D	-	135	247	-	-
	Prci14g0021	373	SMART	Cyclin_C_2	249	366	IPR004367	-
	Prci14g0021	373	PANTHER	CYCLINS	124	352	IPR039361	-
	Prci14g0021	373	SUPERFAMILY	Cyclin-like	248	364	IPR036915	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g0021	Prci-Chr14	313383	316943	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci14g0021	13	370	Core Cell Cycle Gene Families	AT1G20610	51.887	8.40e-142	408

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g0021	K21777		-	qsa:O6P43_011387	517.309