Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0018 ATGGAATATGATGCCTTGGTACACAATAATTCTGCATTCGAGACCTTATCAGACAGTAGTGCCTCAGTCTCGGAAGGGAATGTCATTGACGAGCTCTTTGCACATGGTTGCTGGCTTGAAACCACTGGAGGATCATACAACTTCACGCAGCCTTGTGCTACGAATCCCCCTTCTCTCAGTGACCCTAATTTGCACTATTGGGCATCATCAGACCCAAATCCCCAAATCTATCAACAAGAATCAGAGGTAAGCTTTCCATTCCAATCCGAAAGTTTTGCGGTTGCAAGCGCTGAAGTGGGTAAAAGGTGGTGGATAGGGCCAAAAGCAAATCCCGTTCCATCTTCCTCAGTCAAAGAAAGATTAGTGCTTGCCGTGGGGTACTTGAGAGAATACACCAAAAATACCAACATGTTTATTCAGATATGGGTGCCCACTAGGAGAGAGGGAGCATCCGTTCTAACCAGTGCTCACGATCACGTTCCCCCATGCTCATCCGTTGATGATCCAAACTGTAAGACCCTTGAATATTACCGAAATGTTTCCAAAGGTTATCAGTTGGCTGCCGAGGAGGATTCAGAAGAGTGTCGAGTAGTCCTAGGAAAGTTGCCTGATCAGTGGAGCCCCACTGTTCGGTTTTTCAAAAGCCACGAGTATGTTACGTATGTTAATTATGCACAGCAGCACTATGATTTTCGTGGATCATTGGCCCTTCCCGTGTTTGAGCGTGGCAGCGGGACATGCCTTGGCGTTGTTGAGATTGTAATGACCAATCACAACATCAACTGTCATCCACAAATTGACAATGTCTGCCATTCTCTCCAGACTGTTGATTTTAGTAAGAATTGCCAGAACCTTATTTCTCCAGCCGTGAAGGTATTTGACGACTTGTACCTAGCTGCACTGAATGAGATAATAGAGGTGTTGACCTCAGTGTGCAAGACACATAATTTGCCTTTAGCTCTGACTTGGGCACCCTGCGGACAACAAGGTAAGGGAGGATGTCCGAACGACAATTTCGTGGGTTGTTTGTCGACCGTGGATTCTGCTTGTTGCGTGGCGGATTTAGAGTTGCTCGGGTTCCAAGAAGCCTGCTCTGAGTACCACCTTCTCAGAGGGCAAGGTATTGTTGGCACAGCATTCACCACCACCAAGCCATGCTTTGCAACGGACATAACTGCCTTCACCAAAACGGAGTATCCTCTGTCTCACCACGCTACAATGTTTGGGTTACATGCCGCCGTCGCTATTCCCCTCCGTAGTGTCTACACCGGATCCGCTGATTTCGTGTTGGAGTTTTTCTTACCGAGGAATTGCCATGACGGTGAAGAACAAAAGCAGATGCTGAATTTACTATGTATTGTGGTACAACAAGCTTGCCGGAGTTTACATGTTGCCATGGACAAACAGGTCGAGGAAGAATTCACGTTTACAGTCGGAGACATGCTGGCTGCGGCTTCAAAAGGTGGAGCCCACAAAGAAGAAACTCTTGAGTTTGGGGGGTCTTGTAATTTAGAAGAACTGTCTTCAAAAGACTCGTCGTGGATTGCACATATGATGGAGGCTCAAACACAGCACAAGGGTAAAGGCGTGTCTGTGTCGTTGGAATACCTGGAAGAACCAAAACATGAGTTCAAAGTGACAACCAACTGGGAGGGCACTCACGGGGGATTCTGCCATGGGCAGACATTTTCTGATTATGTACAAGTTCACCAGAGCTCAGCAGTATCCAGGGCGAGTGTAGAGGGTGGAGGAGAATCTTATGGTTTTGGTGGACGCCGCTCATCGGGCAGCAGAAAATCAGGCGAGAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCCAGTTCTCCGACAATACTTTGCAGGAAGCCTTAAAGATGCTGCCAAGAGCATCGGCGTATGTCCCACGACTCTTAAAAGGATATGCAGACAACATGGAATTACCAGATGGCCTTCAAGGAAAATAAAGAAGGTAGGACATTCGTTAAGGAAACTTCAGCTTGTGATCGATTCAGTGCAAGGTGCTGAGGGCGCCATTCAGATCGGTTCCTTCTATTCCAGTTTTCCAGAGTTGAGCTCCACAAATTTGTCTGGCAGTGGTCCCTCTCAGTCATCAAACATCAGCGGCGACCACTCTAAGAAAGTACATGCTCATGCCGAGAACGGCTTATATAGCCACGGTGGCACAACATTAAAATCTCCGCCCTCTTGTTGCAGCCAGACTTCCACCATCATCAACGCCGTGTCCAGTGGGGATGTTTTAATGGCAGAAAACCCGGAAGGGTCGCTCAAGAGAGCTCATACTCAAGTCGAAGCGGAGTTGCATGAGGATACAAAACATTTCGCAAGCCGGCAAAAGCCGCTTGGTGAGCATCCAAGTGTCGAGGTTTTGCCTCCATTGCCTGAAAATAGTGGGTGGAACGCGCGAGACGGAGGTGCTTTTAGGGTGAAAGCTACTTTTGGGGATGAAAAAATTCGTTTTAGCTTGCAGCCGAATTGGGGGTTTCGAGAACTGCAACTGGAGATCGCAAGACGATTCAATCTAGACGATGTGAGCAACATCGGTCTCAAGTATTTAGATGAGGAGGGTGAGTGGGTTCTTTTAACATGCGATGCTGATCTTGAGGAGTCTAAAGACGCATATCGATCATCTAAGAGCCGTACAATGAGGTTCGCCCTCTTTCAAGCTTCGCCGCTAAATCTGGCCAACACTTTTGGCTGCAACAGCTCATCCTGA 2739 0.4772 MEYDALVHNNSAFETLSDSSASVSEGNVIDELFAHGCWLETTGGSYNFTQPCATNPPSLSDPNLHYWASSDPNPQIYQQESEVSFPFQSESFAVASAEVGKRWWIGPKANPVPSSSVKERLVLAVGYLREYTKNTNMFIQIWVPTRREGASVLTSAHDHVPPCSSVDDPNCKTLEYYRNVSKGYQLAAEEDSEECRVVLGKLPDQWSPTVRFFKSHEYVTYVNYAQQHYDFRGSLALPVFERGSGTCLGVVEIVMTNHNINCHPQIDNVCHSLQTVDFSKNCQNLISPAVKVFDDLYLAALNEIIEVLTSVCKTHNLPLALTWAPCGQQGKGGCPNDNFVGCLSTVDSACCVADLELLGFQEACSEYHLLRGQGIVGTAFTTTKPCFATDITAFTKTEYPLSHHATMFGLHAAVAIPLRSVYTGSADFVLEFFLPRNCHDGEEQKQMLNLLCIVVQQACRSLHVAMDKQVEEEFTFTVGDMLAAASKGGAHKEETLEFGGSCNLEELSSKDSSWIAHMMEAQTQHKGKGVSVSLEYLEEPKHEFKVTTNWEGTHGGFCHGQTFSDYVQVHQSSAVSRASVEGGGESYGFGGRRSSGSRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYSSFPELSSTNLSGSGPSQSSNISGDHSKKVHAHAENGLYSHGGTTLKSPPSCCSQTSTIINAVSSGDVLMAENPEGSLKRAHTQVEAELHEDTKHFASRQKPLGEHPSVEVLPPLPENSGWNARDGGAFRVKATFGDEKIRFSLQPNWGFRELQLEIARRFNLDDVSNIGLKYLDEEGEWVLLTCDADLEESKDAYRSSKSRTMRFALFQASPLNLANTFGCNSSS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0018 912 MobiDBLite consensus disorder prediction 581 608 - -
Prci14g0018 912 Pfam RWP-RK domain 612 659 IPR003035 -
Prci14g0018 912 ProSiteProfiles RWP-RK domain profile. 598 679 IPR003035 -
Prci14g0018 912 MobiDBLite consensus disorder prediction 696 715 - -
Prci14g0018 912 CDD PB1_NLP 815 896 IPR034891 -
Prci14g0018 912 Gene3D - 813 899 - -
Prci14g0018 912 MobiDBLite consensus disorder prediction 696 711 - -
Prci14g0018 912 SUPERFAMILY CAD & PB1 domains 804 899 - -
Prci14g0018 912 SMART PB1_new 814 897 IPR000270 GO:0005515
Prci14g0018 912 ProSiteProfiles PB1 domain profile. 814 897 IPR000270 GO:0005515
Prci14g0018 912 PANTHER PROTEIN NLP8 67 900 IPR045012 GO:0003700
Prci14g0018 912 Pfam PB1 domain 815 896 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0018 Prci-Chr14 265237 269954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0018 10 907 NLP Transcription Factor Family AT4G35270 45.764 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci14g0018 PB1 3.1e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0018 - - pcin:129292760 1810.81