Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci1491g0008 | ATGACTAGCAGACAAGGAATGGGTGTTGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAGAATGGAACTGTCCTTAAGGGGTTAGATTTAGGGGTGCAAGGAATGCGAGTAGGCGGCCAGAGGTTGTTAATTGTTCCTCCTGAACTGGCCTATGGAAGTAGAGGAGTCCAGGAGATCCCTCCAAACGCAACAATAGAGCTGTACAACTTGAATGATGTATGCCTTTTAAGAAACTCCTTCGCTGTCCATACAATTTCATTACTGCCACTGAATTCCCAAAGTTTACACTCTGGAGAATGTGTCCCTAAGGAATCTAGTGTAGTTGGAAAGATTTGTTCATGTTGCTGCTTAGTAGTTTCTACACATTAA | 378 | 0.4365 | MTSRQGMGVGGGTPYGFDVGQSENGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSRGVQEIPPNATIELYNLNDVCLLRNSFAVHTISLLPLNSQSLHSGECVPKESSVVGKICSCCCLVVSTH | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci1491g0008 | 125 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 9 | 69 | - | - | |
| Prci1491g0008 | 125 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 68 | IPR001179 | GO:0003755 | |
| Prci1491g0008 | 125 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 11 | 69 | IPR001179 | GO:0003755 | |
| Prci1491g0008 | 125 | SUPERFAMILY | FKBP-like | 10 | 68 | - | - | |
| Prci1491g0008 | 125 | Gene3D | - | 2 | 73 | IPR046357 | GO:0003755 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci1491g0008 | 12 | 70 | Calmodulin-binding Proteins | AT5G48570 | 48.333 | 1.59e-12 | 61.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci1491g0008 | - | - | pcin:129300245 | 231.491 |