LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1491g0005	ATGATCACTGAACCAAAAATAAACATAAGCTCACGTTTCCGATTTAGCCATGTCCTCCTCCTTTTCTTTTACCTCAGTAATCATTGTACTTCTCAAAAGACTTGCCCGAACTGTGGCTCCTTACAAATTCCATACCCTTTAAGCACGGACCCTAGCTGTGGGGATCCATCCTATAGCCTTCACTGTGATCCCAAATCAAGAAAACTCTACTTTTTCACCCTCAATGGCAGTTCCTATTCCGTTCTCAGAACCATGCCTTCGATTCAGCGCTTGGTGGTGCAGCCATCACCTTGGCTTTCTAGTTCATGTGTTACTCAAGATATGCCTGCAAGTGGTGGCCTCTGGTTAAACCAGTCACTTCCTTTCAAAATAACTTCATCCAACACAATCTTCCTCTTCAACTGCTCCCCGCGCCTGTTAGTTTCTCCTCTCAATTGCACTTCTTCGAGTCTTTGTCACCGTTACTTGGAGAGCTCAGGACATGTTGATGGTAGAAGAGCTACTCAGTGTGCTAGCGGTCTTGGCCCTTGTTGCACCTTTGTTGCAGGGGGGATGCCTTCAGCATACAAGATACGCCTTCACAGCTCTGGCTGTAAAGCATTCAGAAGCATCCTTCATTTAGATGCAGAAAAGCCTGCTTATCAGTGGGAGGAAGGTCTTGAAATTCAGTGGGCTTCTCCTACTGAACCTCTCTGCAGGACACAAGAAGATTGCTCTGGGGCTTCTATCTGCTCACCTGCTGAAAAAAATGGAGTCTTTCGCTGTCTTTGTAAGGGCAAACACCATTGGGACCCTATTGCTGCAACTTGCTTTAAGAACAAGAAAAAGTCTAAATCACAAATCAGCTTAACAGTCTCGTTTGTGGTCATAACATTTTTTTGCCTAGCCACAGTTATGGCCATTATCTTAAGGAGGTCCAGGAAGCTCTCTCACGGGTCAAAGCAGGCCAAGACTATAGAAGATGTGATAAAGTCAAATTCTGGAGAGACACCTGCTAGGATGTTTAAACTGAAGGAGGTGATAAAAATAACAAACAGATTTTCTCAAGACAGTATTTTGGGAAAAGGTGGGTTTGGGGAAGTTTACAGAGGTGAACTCCAAGATGGGACAGCTGTGGCTGTGAAGCAAGCTAGATTGGGCAACCTCAAAAGCATTCAGCAGATACTAAACGAGGTTGCAATTCTTTCTCAAGTCAATCACAAGAACCTAGTCAGGCTCCTAGGTTGCTGTGTAGAGTCTGAGCAGCCTCTGATGATCTATGAGTTCATTTCAAACGGGACACTCCATGACCATCTTCATGGTAGGTATTCCAACTTCCTAGACTGGAAAACAAGGCTGAAGGTTGCTTTTCAAACTGCTGAAGCATTGGCTTATCTTCATTCTGCCGCACATACTCCCATTTACCATAGAGATGTGAAGTCCACAAACATACTGCTAGATGATGAATTTAACGCCAAGGTTGCAGACTTCGGGCTCTCCAGATTGGCTAACCCAGGGCTTAGTCATGTATCAACCTGTGCTCAGGGAACATTAGGCTATGTGGATCCTGAGTATTACCGCAACTACCAGTTAACTGATAAAAGCGACGTTTATAGTTACGGGGTTGTGTTGCTAGAGCTTTTGACTTCTCAGAAGGCCCTAGATTTCTCAAGAGAGCAAGATGATGTGAACCTAGCAATTTTCGTCGGTCAACATGCCGTCAACGGGTCCATCATGGAACTGGTAGATCAGAGGCTCCTAATGTCTAAGGAACCATCTGATGATAAAATAAAAACAAGCATACAACTATTCTCAGAGCTAGCACTCAGCTGTCTGAGGGAAAAGAAAAGCGAAAGGCCGAATATGAAGGACATTGTTCAACACCTTCAATGCATCATTAAAATTGCAGATCAAGTGAGGAACAGTGATGATGCATCTGTTTAA	1923	0.442	MITEPKINISSRFRFSHVLLLFFYLSNHCTSQKTCPNCGSLQIPYPLSTDPSCGDPSYSLHCDPKSRKLYFFTLNGSSYSVLRTMPSIQRLVVQPSPWLSSSCVTQDMPASGGLWLNQSLPFKITSSNTIFLFNCSPRLLVSPLNCTSSSLCHRYLESSGHVDGRRATQCASGLGPCCTFVAGGMPSAYKIRLHSSGCKAFRSILHLDAEKPAYQWEEGLEIQWASPTEPLCRTQEDCSGASICSPAEKNGVFRCLCKGKHHWDPIAATCFKNKKKSKSQISLTVSFVVITFFCLATVMAIILRRSRKLSHGSKQAKTIEDVIKSNSGETPARMFKLKEVIKITNRFSQDSILGKGGFGEVYRGELQDGTAVAVKQARLGNLKSIQQILNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEFISNGTLHDHLHGRYSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYVDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKALDFSREQDDVNLAIFVGQHAVNGSIMELVDQRLLMSKEPSDDKIKTSIQLFSELALSCLREKKSERPNMKDIVQHLQCIIKIADQVRNSDDASV	640

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1491g0005	640	ProSiteProfiles	Protein kinase domain profile.	347	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1491g0005	640	Gene3D	Transferase(Phosphotransferase) domain 1	423	639	-	-
	Prci1491g0005	640	SUPERFAMILY	Protein kinase-like (PK-like)	324	623	IPR011009	-
	Prci1491g0005	640	ProSitePatterns	Protein kinases ATP-binding region signature.	353	375	IPR017441	GO:0005524
	Prci1491g0005	640	Gene3D	Phosphorylase Kinase; domain 1	307	422	-	-
	Prci1491g0005	640	SMART	serkin_6	347	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1491g0005	640	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	321	422	-	-
	Prci1491g0005	640	FunFam	Wall-associated receptor kinase-like 20	423	635	-	-
	Prci1491g0005	640	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	467	479	IPR008271	GO:0004672\|GO:0006468
	Prci1491g0005	640	Pfam	Protein tyrosine and serine/threonine kinase	350	622	IPR001245	GO:0004672\|GO:0006468
	Prci1491g0005	640	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	19	627	IPR044652	GO:0004672
	Prci1491g0005	640	CDD	STKc_IRAK	353	623	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1491g0005	35	631	Receptor kinase-like Gene Family	AT5G02070	46.582	0.0	528

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Prci1491g0005		PK_Tyr_Ser-Thr	2.4e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1491g0005	-		-	gmx:100804678	944.88