Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1487g0001 ATGGTTGATTCCAAACTCCAAGGATATATCCAACTTCTCTTCATTTGGCTTCTGTCCACCTTCCTAGTTCTAACAATACTGAAGACAAAACAGAGGAAGGCTCGTCGTCCACCCAGCCCACTAGCCCTCCCTATCATCGGACACCTTCACCTTCTTTCCCCTCTTCCTCATCGAGATTTTTACAACCTTTCCCTTCGCTATGGTCCTATCATCCACCTTTCCCTCGGCTCTGTTCCTTGCGTGGTCGCCTCCTCTGCTGAAGCTGCCAAAGAATTCCTTAAAACTCACGAACTTTCTTTCTCCAATCGACCAGCTCGAACTGTTGCTGTCCGGCACTTGACCCTATTCATGTCTGAACTTCTAGGCGGGAAGATGCTCGACCAGCTCCTTTTGGTGAGGGAGCAAGAGACGAAGAGATTTCTGAGAACTTTGCTTCAGAAAGGGAAGGTCGGCGGCGAGGCGGTGGATGTTGGAGCAGAGCTCATGGTGCTTTCGAATAACATTGTATCCAGAATGACTGTGAGTAAAACGAGCTCTCAAAATGAAGATGAAGCCGACGTGGTGAGGAAGTTGGTGATCGATGCCGCTGAGCTCTCCGGGAAGTTTAACATATCGGACTTCATCGCGTTCTGCAAGATATTTGATTTGCAGGGATTCAACAAGAGGTTGAAGGAAGTCCGAGAGAGGTTTGATACCATGATGGAAAGAGTAATAGAAGAGCACCAAGAAGAAAGGAGGAGGAGAAAAGACACGGGCATTAGAGGAGATCAGACCAGGGATATACTGGACGTTTTGTTAGACATACACGAAGATGAGAACTCGGAGACGAAATTGACAAAAGAGAACATCAAGGCGTTTATCATGGACATATTTGTGGCAGGGACAGACACATCCTCCATAACCATTGAATGGGCTCTGGCAGAGTTAATCAACCATCCGCGCGTAATGAAGGAAGCAAGACAAGAGATTGATTCAGTAATCGGAAAGACCAGAATAGTAGGGGAGTCCGACATAGTGAAACTCCCTTACCTTCAAGCCGTAGTCAAAGAAACGATGAGGATTCACCCTGCGGGCCCATTGATCTTCAGGGAATCGTCAAGAAGCTCTGTAGTGTGTGGATACGAGATTGCAGAGAAGACCCGGTTATTTATAAACGTGTGGGCTATTGGCAGGGATCCCAGTCAGTGGGAGAACTCTCATGAGTTTAGGCCAGAGAGATTTATGAGCGAAGACGGAAAAGGTCAATTAGATGTTAGGGGTCAGCATTTTGAATTGATTCCTTTCGGGAGCGGAAGAAGAGGATGTCCTGGAACGTCACTGGCTCTTCAGGTTGTGCACGCCAATCTTGCAGCTATGATTCAGTGCTTCGAATGGAAGGTAAGTGGCGCGATTAGCATGGAGGAAAAAGCCGGGATTACCCTTCCAAGGGCTCACCCCCTTATTTGTGTCCCCGTGCCCAGGCTTGATCCATTTCCTTCTGTATCTTGGTGA 1491 0.4775 MVDSKLQGYIQLLFIWLLSTFLVLTILKTKQRKARRPPSPLALPIIGHLHLLSPLPHRDFYNLSLRYGPIIHLSLGSVPCVVASSAEAAKEFLKTHELSFSNRPARTVAVRHLTLFXMSELLGGKMLDQLLLVREQETKRFLRTLLQKGKVGGEAVDVGAELMVLSNNIVSRMTVSKTSSQNEDEADVVRKLVIDAAELSGKFNISDFIAFCKIFDLQGFNKRLKEVRERFDTMMERVIEEHQEERRRRKDTGIRGDQTRDILDVLLDIHEDENSETKLTKENIKAFIMDIFVAGTDTSSITIEWALAELINHPRVMKEARQEIDSVIGKTRIVGESDIVKLPYLQAVVKETMRIHPAGPLIFRESSRSSVVCGYEIAEKTRLFINVWAIGRDPSQWENSHEFRPERFMSEDGKGQLDVRGQHFELIPFGSGRRGCPGTSLALQVVHANLAAMIQCFEWKVSGAISMEEKAGITLPRAHPLICVPVPRLDPFPSVSW 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1487g0001 497 PANTHER CYTOCHROME P450 98A9 13 490 - -
Prci1487g0001 497 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 SUPERFAMILY Cytochrome P450 37 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Prci1487g0001 497 FunFam Cytochrome P450 family protein 28 483 - -
Prci1487g0001 497 Gene3D Cytochrome P450 26 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 Coils Coil 217 237 - -
Prci1487g0001 497 CDD CYP93 68 485 - -
Prci1487g0001 497 Pfam Cytochrome P450 37 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1487g0001 497 Pfam Cytochrome P450 116 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1487g0001 1 488 Cytochrome P450 AT5G06900 46.169 5.16e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1487g0001 K24188 - gmx:100779342 661.759