Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1484g0001 ATGGCCTACATGTGTGCTGACAGTGGCAATCTTATGGCGATTGCTCAGCAAGTCATTAAGCAGAAGGAGCAGCAAGAGCAGCAGCAGCAGCAGCATCAGCATCAGCATCAGCATCATCAGAGCCATAATCACCACCACCACCACCACCACCACCACCAGAATCACCAGCAACAGCAACTTCTGGGGATTCATTCGATCGCTCTTCATCCATGGACGAATACTGCGCCTCTGGGTTATGGCCTCGCCGGAGCTGATTTCTCCGACCCTTTTCAGGTTGGGTCTGGTCCCGATGCCTCGGAGTCTGGTTTTCAGTTTCCTCATCTGGACCCCCACCACTCCACTGGGTTTAGGTTCTCCGATTTCACTGCTGATGCTGGCGGTGGCGCGTGTGGTGCTGCTGGTGAGTTTGATTCCGACGAGTGGATGGATAGCTTGATGGGCGGTGCTGGTGGCACTGGTGATTCAACGGATAGTTCCAATCTGCCTTCTGCGTGCGACGCGTGGCAGAACAATGCCGATTTTGGTCTTTACGCCTCCAACCCCTTCGCCACCTGCCCTACCCGACTCTCGCCTCCGTCGGACCTTAATCGGGTCATTTTCTCGTCGGAGCCTGCCACGTGGACCTCTCCGCCACCGCCATCTCCACCGACCTTAGTGAAAGAACCTGCTGAAACTAAACCAGCACCAGCTTCGCCGCCAACGGCGGAGCCTGCCGTTCGCCGAAACGACAGTGGCCACGGCGTTTCGTCGAGCGTCGCGGAAACTAGTGAGTCCACACATCCGCTTCTAAAAGCACTCATCGACTGTGCCGGACTGGCCGAGACCGAACCGGATCAGGCCGAAGAATCTCTAGTTCAGCTCAGCAAAACGGCGTCGCAGCACGGAGATCCTACTCAGAGAGTCACCTTCTTCTTCTGCGAAGCTTTACGCAGCAAAATCAAACCAGAAACAATGGAGGCTCCTACTTCTACTACTTCAGAGGAGGAGTTAACACTCTCGTACAAAGCTCTGAACGATGCGTGTCCTTATTCGAAGTTCGCTCATCTAACCGCGAATCAAGCTATACTGGAAGCTACCGAAGGAGCCACAAAGATTCACATAGTGGATTTTGGGATTGTTCAAGGTGTTCAATGGGCTGCTCTATTACAAGCATTCGCTACTCGATCTTCAGGGAAGCCTGCAAGCATTCGCATTTCTGGAATACCTGCGATGTCTCTGGGAACATCTCCTCGTGCTTCTTTGCTTGCCACAGGGAATCGTCTCTCTGAGTTCGCGAAGCTTCTGGACTTGAACTTCGAGTTCGAACCTATTCTAACTCCAATTCATGAGCTGAACCAGTCCAGCTTCGCTACTGATCCTGACGAGGCCTTGGCTGTGAACTTCATGCTTCAATTGTATAATCTGTTGGATGAGAGTAACGTTGCGGTGGAAACTGCACTTCGATTGGCTAAGTCTTTGAAACCTAGAATTGTTACTCTAGGAGAGTATGAAGCTAGCTTGACCAGAGTTGGATTCCTGAACCGGTTCAAGACTGCGTTGAGGTACTTCACAGCGATTTTCGAATCTTTGGAACCGAACTTGCCGCGAGACTCGCCTGATAGGATCCGAGTGGAGAGACTTCTGCTAGGCCGGAGAATTGCTAGCGTGGTTGGATCAAGGTCGCAGGGGACTGTAAGAGAACATATGGAAGATAAAGAACAGTGGAGGATTTTGATGGAAAGTTCTGGATTTGAATCTGTAAACCTCAGCCATTATGCAATTAGTCAAGCTAAGATTCTTCTATGGAATTACAACAGTACTCTTTATACATTGGTGGAATCTGAACCTGGGTTTTTGACTCTGGCTTGGAATGAAGTCCCTCTCCTGACTGTTTCTTCTTGGCGTTAA 1887 0.5087 MAYMCADSGNLMAIAQQVIKQKEQQEQQQQQHQHQHQHHQSHNHHHHHHHHHQNHQQQQLLGIHSIALHPWTNTAPLGYGLAGADFSDPFQVGSGPDASESGFQFPHLDPHHSTGFRFSDFTADAGGGACGAAGEFDSDEWMDSLMGGAGGTGDSTDSSNLPSACDAWQNNADFGLYASNPFATCPTRLSPPSDLNRVIFSSEPATWTSPPPPSPPTLVKEPAETKPAPASPPTAEPAVRRNDSGHGVSSSVAETSESTHPLLKALIDCAGLAETEPDQAEESLVQLSKTASQHGDPTQRVTFFFCEALRSKIKPETMEAPTSTTSEEELTLSYKALNDACPYSKFAHLTANQAILEATEGATKIHIVDFGIVQGVQWAALLQAFATRSSGKPASIRISGIPAMSLGTSPRASLLATGNRLSEFAKLLDLNFEFEPILTPIHELNQSSFATDPDEALAVNFMLQLYNLLDESNVAVETALRLAKSLKPRIVTLGEYEASLTRVGFLNRFKTALRYFTAIFESLEPNLPRDSPDRIRVERLLLGRRIASVVGSRSQGTVREHMEDKEQWRILMESSGFESVNLSHYAISQAKILLWNYNSTLYTLVESEPGFLTLAWNEVPLLTVSSWR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1484g0001 628 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 622 IPR005202 -
Prci1484g0001 628 Coils Coil 15 35 - -
Prci1484g0001 628 ProSiteProfiles GRAS family profile. 253 628 IPR005202 -
Prci1484g0001 628 MobiDBLite consensus disorder prediction 35 55 - -
Prci1484g0001 628 MobiDBLite consensus disorder prediction 19 59 - -
Prci1484g0001 628 MobiDBLite consensus disorder prediction 206 234 - -
Prci1484g0001 628 MobiDBLite consensus disorder prediction 202 257 - -
Prci1484g0001 628 Pfam GRAS domain family 263 628 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1484g0001 1 628 GRAS Transcription Factor Family AT5G66770 56.940 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1484g0001 GRAS 3.8e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1484g0001 - - qsa:O6P43_033716 778.089